Pseudomonas moraviensis R28-S, PMO01_27960 (glyS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAAGCGGGCGGCATCGAGTGCTACCCGGTGACCGGCGAGATCACCTACGGTCTCGAGCGTCTGGCGATGTACCTGCAAGGCGTCGATTCGGTCTACG ACCTGGTCTGGGCTGACGGACCGTTCGGCAAAGTCACCTATGGCGATGTGTTCCACCAGAACGAAGTGGAGCAGTCCACCTACAACTTCGAACACGCCAA CGTCGACAAACTGTTCGAGCTGTTCGACTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCGAGCTACGAAATGGTG CTGAAGGCGTCGCACACCTTCAACCTGCTGGATGCGCGCCGGGCGATCTCGGTGACCGCGCGTCAGCAATACATTCTGCGCGTACGCACCCTGGCGCGTT CCGTTGCGCAAGCCTACCTGCTGGCCCGCGCCAAGCTGGGCTTCCCGATGGCGACCCCGGACCTGCGTGACGAAGTACTGGCCAAGCTGGAGGCTGCACA
|
|
| DNA Sequence for Gene |
>PMO01_27960
|glyS
ATGAGTGCGCAAGATTTTCTGGTTGAACTGGGCACCGAAGAACTGCCACCCAAAGCCCTGAACACTTTGGCTGATGCGTTCCTCGCCGGTATCGACAAGG GCCTGCAAGCCGCCGGCCTGAGCTACGAAAGCAAAACCGTGTATGCCGCGCCACGTCGTCTGGCCGTGCTGATCACTGCGCTGGCCACTCAGCAGCCGGA TCGCAGCATCAACCTCGATGGCCCGCCACGTCAGGCCGCGTTCGACGCTGATGGCAATCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTC GAGCTGAGCGAAATCGACCAGAGCGGTCCGAAACTGCGCTACAGCCAGAACATCGCCGGCAAGCCGACTGCGAGCCTGCTGCCGACCATCGTCGAAGATT CGCTGAACGACCTGCCGATTCCGAAACGCATGCGTTGGGGTGCGCGCAAGGAAGAGTTCGTGCGTCCGACCCAGTGGCTGGTGATGCTGCTCGGTGACCA GGTCATCGATTGCACGATCCTCGCGCAGAAGGCTGGCCGTGAATCTCGTGGTCACCGTTTCCACCATCCGCAAGCCGTACGCATCGGTTCGCCGTCGAGC TACCTAGCCGACCTGCGTGCCGCTTACGTATTGGCCGATGCCAACGAGCGTCGCGAGATCATCAGCAAGCGCACCGAAGAGTTGGCCACCCGTCAGGAAG GCACGGCGATCGTTCCGCCGGCATTGCTTGACGAAGTGACCGCGCTGGTCGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAACGCTTCCTCGACGT GCCGCAGGAAGCGCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGATGCCGACGGCAAGTTGCTGCCACGTTTCATTACCGTGGCC AACATCGAAAGCAAAGACCCGCAGCAGATCATCGCCGGTAACGAGAAAGTGGTTCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGA AGCAGAAGCTCGAAGACTTCAACCTGCGCCTGCAAAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGAGCGCGTTTCCAAACTGGC CGCGTACATCGCCGCGCGCATCGGCGGCAACGCCTCGTGGGCTGCCCGTGCGGGCCTGCTGTCGAAGTGCGACCTGGCCACCGAAATGGTCGGCGAGTTC CCGGAGATGCAAGGTGTCGCCGGTTACTACTACGCGCTCAATGACGGCGAGCCACAGGATGTCGCGCTGGCACTGAACGAGCAGTACATGCCACGCGGTG CCGGGGCTGAATTGCCGGCGACCCTGACCGGTGCAGCTGTCGCCATCGCCGACAAGCTCGACACTCTGGTCGGCATCTTCGGTATCGGCATGCTGCCAAC CGGCAGCAAAGACCCATATGCCCTGCGCCGTGCGGCACTGGGCGTGCTGCGGATCCTGATCGAGAAACAACTGGATCTGGACCTGAACGACGCCGTGGCT TTCGCGGTGAATGCGTTCGGCGGCAAGGTCAAGGCTGCCGGCCTCAACGAAGCCGTGCTGGAATTCATCTTCGACCGTCTGCGTGCGCGTTATGAAGATG AAGGCGTCGACGTCGCCACTTACCTGTCGGTACGTGCGCTCAAGCCAGGCTCGGCGCTGGACTTCGACCAGCGTGTGCAGGCGGTGCAGGCCTTCCGCAA ACTGCCGGAAGCGGCAGCGCTGGCGGCGGTGAACAAGCGCGTATCGAACCTGTTGAGCAAAGTCGAAGGCTCGGTACCGACCGTGGTCGAAGCCAAGTAT TTCGACAACGCCAACGAGTTCTCGCTGTATTCGGCAATCCAGCAAGCGGATCAAGCGGTGCAGCCAATGGCCGCGGCGCGTCAGTACAACGAATCGCTGG CACGCCTGGCGGCACTGCGCGAGCCGGTCGACGCATTCTTCGACGCGGTGATGGTCAATGCCGACGACGCCAATGTGCGGGCCAACCGTTACGCGCTGCT GGCGCGCCTGCGTGGCCTGTTCCTCGGTGTTGCCGACATTTCGCTGCTGGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGATTGCTGTTGAAACTGCTGATTCTCGATCGTGACGGCGTGATCAATTACGACTCCGATGCCTACATCAAGTCGGTGGAGGAGTGGATTCCGCTGCCC GGCTCGATCGAAGCGATTGCGCAGTTGAGCAAGGCCGGCTGGACGGTGGCGGTGGCCACCAACCAGTCGGGCATTGCTCGCGGCTATTACGACCTCGCCA CCCTCGAGGCCATGCACGCGCGCCTGCGCGAGCTGGTCGCGAAGCAGGGCGGCGAGGTCGGCTTGATCGTGTATTGCCCGCATGGCCCGGATGAGGGTTG CGATTGCCGCAAACCGAAACCGGGAATGCTGAAAGCCATTGCCGAGCATTACACGGTGCCGTTGACCAACGTCTGGTTCGTCGGTGACAGCCTTGGTGAC CTGGAGGCCGCCAAAGCCGTCGATTCACAGCCAGTTTTGGTGAAGACCGGGAAAGGCGAAAAGACTCAGGGCAAAACCCTGCCGGTTGGCACCCTGATTT
|
|
| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSAQDFLVELGTEELPPKALNTLADAFLAGIDKGLQAAGLSYESKTVYAAPRRLAVLITALATQQPDRSINLDGPPRQAAFDADGNPTQAALGFAKKCGV ELSEIDQSGPKLRYSQNIAGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQVIDCTILAQKAGRESRGHRFHHPQAVRIGSPSS YLADLRAAYVLADANERREIISKRTEELATRQEGTAIVPPALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDADGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKAERVSKLAAYIAARIGGNASWAARAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPATLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLNDAVA FAVNAFGGKVKAAGLNEAVLEFIFDRLRARYEDEGVDVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEAAALAAVNKRVSNLLSKVEGSVPTVVEAKY FDNANEFSLYSAIQQADQAVQPMAAARQYNESLARLAALREPVDAFFDAVMVNADDANVRANRYALLARLRGLFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|