Pseudomonas moraviensis R28-S, PMO01_27935 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCTTCGAACAGACCTTGAGCGAACTGGTTGAGCTCGAGGGTTTGACGCTCAGCTATTACCGAGGCTGGGACAAGGACCGCGAATTGAGCGCCGTACTCG CCGGTTCCGTGCAACGGGACCAGCAGATGGGGCACACCCAGGCCGGACCGCAACGAGCTGATTTGCGTCTCAGATTGGGCGCACACAATGCCGCGGACAT CCTGTCCCGGGGTCAGCAGAAGCTTGTGGTCTGTGCACTACGGATTGCCCAAGGGCACCTGGTCAGCCAGGCCCGCCGCGGACAGTGTATTTATCTGGTG GATGACTTGCCGTCCGAGCTGGACGAGAGCCACCGTCGCGCGCTGTGCCGCTTGCTGGAAGACTTACGCTGCCAGGTGTTCATCACCTGTGTAGATCACG AATTACTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGCA
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| DNA Sequence for Gene |
>PMO01_27935
|gyrB
TTGAGCGAAGAAAATACGTACGACTCAACGAGCATTAAAGTGCTGAAAGGCCTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGTGACACCGACG ATGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTCGCCGGCCATTGCGACGACATCAGCATCATCATCCACCC GGACGAATCCATCACCGTTAAAGACAACGGTCGTGGCATCCCGGTAGACGTGCATAAAGAGGAAGGCGTTTCCGCCGCCGAGGTCATCATGACCGTCCTC CACGCTGGCGGTAAGTTCGACGACAACTCCTACAAGGTATCCGGCGGTCTGCACGGTGTAGGTGTGTCGGTAGTGAACGCACTGTCCGAAGAACTGGTCC TGACTGTTCGCCGCAGTGGCAAGATCTGGGAACAGACTTACGTTCACGGCGTGCCTCAGGCACCGATGGCCATCGTTGGCGACAGCGAAACCACCGGTAC CCAGATCCACTTCAAGGCTTCCAGCGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTCGCCAAGCGCATTCGTGAACTGTCCTTCCTCAACTCC GGTGTCGGCATCGTCCTCAAGGACGAGCGCAGCGGCAAGGAAGAACTGTTCAAGTACGAAGGCGGCCTGCGTGCGTTCGTTGAATACCTGAACACCAACA AGACTGCGGTCAACCAAGTGTTCCACTTCAACATCCAGCGTGAAGACGGCATCGGCGTGGAAATCGCCTTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCGCAGCGCGACGGCGGCACCCACCTGGTGGGCTTCCGCTCGGCGCTGACGCGTAACCTGAACAACTACATCGAACAG GAAGGTCTGGCGAAGAAGCACAAAGTCGCCACCACCGGTGACGATGCCCGTGAAGGCCTCACCGCGATCATTTCGGTGAAGGTGCCGGATCCGAAGTTCA GCTCGCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACTGCGGTGGAACAGGAGATGGGCAAATACTTCTCCGACTTCCTCTTGGAGAACCCGAA CGAAGCCAAGCTGGTAGTCGGCAAGATGATCGACGCCGCCCGTGCCCGTGAAGCCGCGCGCAAGGCCCGTGAGATGACCCGCCGCAAAGGCGCGCTGGAC ATCGCCGGCCTGCCGGGCAAACTCGCTGACTGCCAGGAGAAAGACCCGGCGCTGTCCGAACTGTACCTGGTGGAGGGTGACTCCGCGGGCGGTTCTGCCA AGCAGGGACGTAACCGCAAGACCCAGGCGATCCTGCCGTTGAAGGGCAAGATCCTCAACGTCGAGAAAGCCCGTTTCGACAAGATGATCTCGTCCCAGGA AGTGGGCACGCTGATCACCGCGCTGGGCTGCGGCATCGGTCGCGAAGAGTACAACATCGACAAGTTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATCCGCACCCTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCGGAGCTGATCGAGCGCGGCTACATCTACATCGCCCAGCCGC CGCTGTACAAAGTCAAGAAAGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCCCTGGAAGATGCGAGCCT GCACCTGAACGAAGAAGCCCCGGGCATTTCCGGTGAAGCGCTGGAACGTCTGGTCAATGACTTCCGTATGGTCATGAAGACGCTCAAGCGTCTGTCGCGC CTGTACCCACAGGAGCTGACCGAGCACTTCATCTACCTGCCGGCCGTCAGCCTTGAAACCCTGGGCGACCATGCAGCGATGCAAGAGTGGCTGGCGCAGT ACGAAGTTCGCCTGCGCACCAACGAGAAGTCGGGCCTGGTCTACAAGGCCAGTCTGCGCGAAGACCGTGAACGTGGCGTCTGGCTGCCAGAGGTCGAACT GATCTCCCACGGCCTGTCGAACTATGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAAACCGTGGTCACCCTGGGCGCGCAACTGAGCACT CTGCTCGACGAAGGCGCGTACATCCAGCGTGGCGAACGCAAGAAAGCCGTTACCGAGTTCAAGGAAGCCCTCGACTGGCTGATGGCCGAAAGCACCAAGC GCCACACCATCCAGCGCTATAAAGGTCTGGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGACCCAAGCGTGCGGCGCATGCTGAAAGTCAC CATCGAAGACGCCATCGGGGCAGACCAGATCTTCAACACCCTAATGGGTGATGCGGTCGAACCTCGCCGAGACTTCATCGAAAGCAACGCGTTGGCGGTT TCCAACCTGGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTGATTGCTACCCGCTCATGAAAAACCCCGGCCAATGCCGGGGTTTTTTTTGCCTCACTCATTCCCAGTGCCGACACTTTCCAACCGATACCCATACC CATAAATCGTCAGCAGCTGCCAACCCCGATCCGCTGTCAGCCCGAGCTTGTTGCGCAATCGGTAGATATGCGTGTCGAGTGGCCGCGAGGAAGTCGTCTC TTCGTTCGGCCAGAAGCGCTCGTACAGATAATCCCGCGACAATGGTCGACCCAGGTTGCTGAACAGGCAGCGCGCCAAGCGGTATTCGCGTTCGGTCATG AGGATCGGTTTGCCTTCACGGGTGACGGTCAGTTCGGCGTCGTCGAAAGTCAGATCGTGGAACGTCTGTACTTCGCCCGCCGCGCTGCGCGGTTGGCTAT GTCGGCGCAATACCGCTGCCACCCTCGCCTTCAACTCATTCGGGCGAAACGGCTTGCTGACATAATCGTCGGCCCCGGCATTCAAGGCTTGAACGATATC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASSETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLETLGDHAAMQEWLAQYEVRLRTNEKSGLVYKASLREDRERGVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDEGAYIQRGERKKAVTEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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