Pseudomonas moraviensis R28-S, PMO01_27080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTTCGCCCGTTTCGACGCCGATCTGGCCTTGTCGGTGGCGCAGTACGACAAGATCATCGACCGCGAATACAAAACCGCCCTGCGTGAGCTGGCCACCT ACATGATGGAAGACCCGCGCTCTATCTCGCGGGTGCTGAGCATCATCTGGGTCCTGCGTTCGCTGGAGCGCATCGGCGATCATGCGCGCAACATCTCCGA ACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGAAAGAAGAAGTTGAAGGCACAAGCGCTGAAACCGCTAATGTT CCGGGCGAAGCTGACGATAAGTAAGATTGCCTGAGAGAAGCGCCCGGCCCTCTGGCCGGGCGTTTTTGTTTCTGCTTTTCAGAAGCGGATTCGTATCAAA AGCAGCACCCGCGAACGAAAAGTCCCGGCGTGACTGAAGAGTTTTGGCAATGTGCCATCAGCCAGCGTTATGCTTGCCGGGATTTTAATAGGGGTGTTGG
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| DNA Sequence for Gene |
>PMO01_27080
ATGAGCAAGATCAGTGTGTTGGTCGTGGACGATGCTTCGTTCATTCGTGACCTGGTGAAAAAGTGCCTGCGTAATTACTTCCCGGGGATCCGCACCGAGG ACGCCATCAACGGCAAAAAGGCCCAGGCCATGCTGGCCAAAGAGGCTTTCGACCTGGTGCTGTGCGACTGGGAAATGCCGGAAATGTCCGGCCTCGAACT GCTGACCTGGTGCCGCGAGCAGGACAACCTCAAGACCATGCCGTTCATCATGGTCACCAGCCGTGGTGACAAGGAAAACGTCGTGCAGGCGATTCAGGCC GGCGTATCCGGTTACGTCAGCAAGCCGTTCACCAACGAGCAGCTGCTGACCAAGGTCAAGCAGGCACTGAACAAGGTCGGCAAGCTCGACACCTTGATGA ACAGCGCGCCGACCAAGATGAATTCGGCGTTCGGCAACGATTCTCTGAGCGCACTGACCGGCGGCAAGCCGGCCGTGGTTGGCGGCGCTGCGACCAGGCC TGCCGCTGCCGCTACTGCACCCGCTCCAGCCGCTCCGCCGTCGCGCGGTTTGCTCAACAGCCCGCCAGTTCAGGCGCCCGGTGCATCCAAGGCGCCGGTG GGCGGTCGTGGTCAGGGCCAGTTGCGCCTGCCGAGCGGTACTCAGCAATGCGTGATCAAGGCCTTGAGCATCAAGGAAGCCCTGCTGGTAGTGAAGCGCA CCGAAACCCTGCCGCAGATCCTCGACAGCGCTGTGCTCGATCTGGAGCAGGGTGACAACGCCGAGATCGCGCGGCTCAACGGTTATCTGCACGCCATCGT CGCCCACGAGCAAAAAGCTGACAGCGACTGGCTGCAACTGACCTTCCGCTTCGTCGACCAGGATGCGCAGAAGCTCGACTACATCTCGCGCCTGATCGCC CGGGGCACGGCGCAGAAGCACTTCGTACCCGGCGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTCGTCGCCCGATAGGCCGCCTTCGCGAGCAGGCTCGCTCCCACAGAGATCACACCGAACCTGTGGGAGCGAGCTTGCTCGCGAAGGGGCCATCAAAA GCACCACCCATCTCCCGCGCTGGCCATTTTGAAACATCTGTCGACTAGCCTGGTCTGTCTCAGCTGCTAGGCTGATTCCCAGGCCTTCCTTCGACAGACT TTTGCCATGCTCGCGCGCCTGCTGTTTTTCTGCGGTCTCTGCCTGGCCTCCCAGCTGGCGATGGCCATGACCATCTACAAATCCACCGACGCCAACGGCG TGGTCTCGTACAGCGACCGCCCGAGCAAAGGCGCGAAAGTGTTCGTGTTTCAGGACCGTATGGTCGAGCGCCTCGACCGCCAGGTGTACCTGGACATCAA GAAGCAGAAGGGCATCGACGTGGTGTTTGCGCGCAACGATCTGTACGCGCCGGTCGAGGTTGCACTGGCCTTCATCGGCACGAGCAATGTGCGTGGCGCG
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| Amino Acid Sequence |
>chemotaxis protein CheY
MSKISVLVVDDASFIRDLVKKCLRNYFPGIRTEDAINGKKAQAMLAKEAFDLVLCDWEMPEMSGLELLTWCREQDNLKTMPFIMVTSRGDKENVVQAIQA GVSGYVSKPFTNEQLLTKVKQALNKVGKLDTLMNSAPTKMNSAFGNDSLSALTGGKPAVVGGAATRPAAAATAPAPAAPPSRGLLNSPPVQAPGASKAPV GGRGQGQLRLPSGTQQCVIKALSIKEALLVVKRTETLPQILDSAVLDLEQGDNAEIARLNGYLHAIVAHEQKADSDWLQLTFRFVDQDAQKLDYISRLIA RGTAQKHFVPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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