Pseudomonas moraviensis R28-S, PMO01_26020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCATCACGTGGGATCCGCGCAACCAGCGACTTATTCTGGGGGAGGAACGCCCACCGGCGCTGTTCACGTGGAAAAGCGATGGCGGCCAGACCCTGCAGGG CGACAAGCAGAAACTGGCCAGCGATCAGCTGGATCTGCGCAACCTGTCGGCGCTGGCTGTCGATCCGCGCACTGGCCATCTGCTGGTGTTGTCCGCCGAT TCGCACCTGTTGCTGGAACTGGACGAAGCCGGCAAGCAAGTCAGCTTCATGACGTTGCTCGGCAGTTTCAACGGTCTGAAAGACACCATCCCCCGCGCCG AAGGCATGACCATGGATGAGGAAGGCACGCTGTACATGGTCAGCGAACCGAACCTGTTCTACCGCTTCGAAAAACATCGGTAACTTTCCCTACAGCAATT GCGGAATTGCGCAGTTGTCGTGCGAGGCAAGTGGCCATTAAGCTTCAATTCAGACGGGCGTGATATTTCATCGGCCTGTCATGAATCCGAGCCTGCCTGA
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| DNA Sequence for Gene |
>PMO01_26020
ATGCGTCGACTTGCCCGCCCCAAACCGCTGATCCTCGTCCTGTTGATGATTGTCCTGATCGCCATGATCGCGATCGGCCAATACCTGCGCCTGTTCGAGC GCGCCTGGTTCAACCTGCACACGCTGTGGCAACCGGTGAGCAGCGAGGCGATCGGCCTGGATCAATATCGGGTGACCATCGAAGCGCGACCGATCGACGG GCTCGACGATGACGTCTCGGCGCTGACCTACGATCCGGTGCGTAAAAGTCTGTTCACCGTGACCAACAAGAATTCCGAACTGATCGAACTGTCGCTGGAA GGCAAGATTCTACGGCGCATCGCTCTGGTGGGGTTTGGCGATCCGGAAGCCGTCGAGTACATCAGCGCCGACACCTACGTGATCACCGACGAGCGTCAGC AACGCCTGATCAAGATCCACCTCGAGGCCGACACCACTTTTCTCGATGCCGAGGATGCCGAGCAAATGACCCTCGGCGTGCACATGTCCGGCAACAAGGG TTTCGAAGGGCTGGCTTACGATTCAGTGGGCAAGCGGCTGTTCGTGGCCAAAGAGCGCGACCCGATGTTGATCTACGAGGTCCACGGCTTCCCGCATTTC AAACCGGACAAGACCTACGCGGTGCACGTGATCAACAACCCCAAGCGCGATGCCGGGATGTTCGTGCGTGATCTGTCGAGTCTGCAGTACGACGAACGCA GCGGGCACTTGCTGGCACTGTCGGACGAGTCGCGGTTGATTATCGAGCTGGATGTCGACGGGCGCCCCTTGAGCACCATGTCGATCAGCGGCGGGCGTCA GGGTTTGCAGAAAACCGTGCCGCAGGCGGAGGGAATTGCGATGGATGATGACGGCACGTTGTACCTGGTGAGCGAGCCGAATCTGTTTTACGTATTCAAG AAACCGGCACAGCCCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAACACCCCACAACACTGTGGGAGCTGGCTTGCCAGCGATGAGGCCATCACTTTCAACATCATTGTTGACTGACAGGCCGCTATCGCTGGCAAGCCAGC TCACAGGTATTTCATTTGCCCACACCAATGTGGGCAGTCCGGCTTACTCAGCCTTCAGGGTTTTCACGCCTTCACTGGTGCCCAGCAACAACAGATCCGC CGGGCGCGCGGCGAACAGGCCGTTGGTGACCACACCGACGATGGCATTGATCTGCGCTTCCAGCTCCACCGGGTTAGTGATCTGCAGATTGAACACGTCG AGGATGATGTTGCCGTTGTCGGTCAACACGCCTTCGCGGTACACCGGGTCGCCACCGAGTTTCACCAGCTGGCGGGCTACGTGGCTGCGGGCCATCGGGA TCACTTCCACCGGCAGCGGGAACTCGCCGAGCACCGGCACCAGTTTGCTGGCGTCGGCGATACAGATGAAGGTCTTGGCCACGGCGGCGACAATCTTCTC
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| Amino Acid Sequence |
>DNA-binding protein
MRRLARPKPLILVLLMIVLIAMIAIGQYLRLFERAWFNLHTLWQPVSSEAIGLDQYRVTIEARPIDGLDDDVSALTYDPVRKSLFTVTNKNSELIELSLE GKILRRIALVGFGDPEAVEYISADTYVITDERQQRLIKIHLEADTTFLDAEDAEQMTLGVHMSGNKGFEGLAYDSVGKRLFVAKERDPMLIYEVHGFPHF KPDKTYAVHVINNPKRDAGMFVRDLSSLQYDERSGHLLALSDESRLIIELDVDGRPLSTMSISGGRQGLQKTVPQAEGIAMDDDGTLYLVSEPNLFYVFK KPAQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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