Pseudomonas moraviensis R28-S, PMO01_25665
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGTCGATGGCGACAAGCGCATCCTGATGATCGATGGCGAGCCGGTGGACTACTGCCTGGCGCGGATTCCAGCCATGGGCGAAACCCGTGGCAACCTCGC CGCCGGTGGCCGTGGCGAAGCGCGTCCGCTGACCGAGAAGGATCGCTGGATCGCCGCCCAGGTCGGCCCGACCCTGCGCGAGAAAGGCCTGCTGTTCGTC GGCCTCGACGTGATCGGCGAGCACCTGACCGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAAATCGACAATGCGTTCGGCACTGACATCGGCGGGA TGCTGATGGATGCTATCGAAAAGCAGCTGCAAGCTTCGAGCAGCAAGCCACAAGCTTGAAGCCGGCCAGCGTCAGCTTGAAGCTTGAAGCTTGAAGCTGC CCCTATGCAGCTTGTCGCTTGAAGCTCGTCGCTTGCAGCTAAAAACCAACATTGCGTTATCATGCCGAGCCCAAAAAAACGCGATGTTGGTTTTTCTACG
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| DNA Sequence for Gene |
>PMO01_25665
ATGACTCTGCCGTCCGATCTGCCCGCTGAACTCGCCCATCGTGGCGTGCGCCCGGCCGATCGCCTCGGTTTTACCCTGTTTCTCGCGGCGCTGATTCACC TGGCGCTGCTGCTCGGCGTCGGTTTCACCATGGTCGAGCCGCAGCAGATCAGCAAAACCCTGGAAATCACCCTGGCCACCTTCAAGGCCGAGAAGAAGCC GGAAAAGGCAGATTTTCTCGCTCAGGAAAACCAGGAAGGCAGCGGCACGCTGGACAAGAAAGCCCTGCCCAAGACCACCGAAGTCGCGCCGTTCCAGGAC AATCAGGTCAAAAAGGTCACCCCGCCACCCGCCGCCAAGCCAGTGGTGCAGGAAGCCGCCCCGAAGGCTGCAGTGACCACCGTCGCGCCGAAACCGAAAA AGGCGCCGACCAAGAAAGAAGAAAGCAAAACCGAAGTCAAACCGACCGTCGACGCGCCGGCGTTCGACAGCTCGCAGTTGTCCAGCGACATCGCCAGCCT CGAGGCGGAGCTGGCCAAGGAACAACAGCTGTACGCCAAGCGCCCGCGCATCCACCGCTTGAGCGCGGCCTCGACCATGCGCGACAAGGGCGCCTGGTAC AAGGACGACTGGCGCAAGAAGGTCGAGCGCATCGGTAACCTCAACTATCCCGAAGAAGCCCGACGCAAGCAGATCTACGGCAATTTGCGCCTGATGGTCT CGATCAATCGCGACGGTTCGCTGTATGAAGTGCTGGTGCTCGAATCCTCCGGCCAGCCGCTGCTCGATCAGGCGGCGCAGCGCATCGTCCGCCTGGCCGC GCCGTTTGCACCTTTTACCGGCGATCTGTCGGACATCGACCGCCTGGAAATCATCCGCACCTGGAAATTTGCCCGGGGCGACAAGCTCTCCAGCAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGCAAAATCAAAAGATCGCAGCCTTCGGCAGCTCCTACAGTGGGCCTGCGTACACCCTGTAGGAGCTGCCGAAGGCTGCGATCTTTTAAAGCCTCAGCT TGTCAGTTCGCCCTTGCGACGCCACACTAGCGCTCATGAAAAACGTCAGCCCCAGCTACCTCAAGCATCACTTCCTGATCGCCATGCCACACATGGCCGA CCCGAACTTTGCCCACACCTTGACCTACATCGTCGAGCACACGGCCAATGGCGCGATGGGGCTGGTGGTCAACAGGCCGCAAGACTTGAACCTGGCCGAC ATCCTCGAACAGCTGCGCCCGGACATCGAGCCGCCGGCGCGTTGCCAGGATGTGCCGATCTTCATCGGCGGGCCGGTGCAGACCGATCGCGGTTTTGTCC TGCACCCGGCGGGCCAAACGTTCCAGGCCACGGCGCAGCTGGACGGCGACCTGGCCCTGTCGACTTCGCAGGACGTGCTGTTCGCCATCGCTGACGGCGT
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| Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MTLPSDLPAELAHRGVRPADRLGFTLFLAALIHLALLLGVGFTMVEPQQISKTLEITLATFKAEKKPEKADFLAQENQEGSGTLDKKALPKTTEVAPFQD NQVKKVTPPPAAKPVVQEAAPKAAVTTVAPKPKKAPTKKEESKTEVKPTVDAPAFDSSQLSSDIASLEAELAKEQQLYAKRPRIHRLSAASTMRDKGAWY KDDWRKKVERIGNLNYPEEARRKQIYGNLRLMVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLSDIDRLEIIRTWKFARGDKLSSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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