Pseudomonas moraviensis R28-S, PMO01_25635

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1762 1822 8.3E-20
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1074 1171 2.4E-8
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 631 717 2.82875E-8
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1687 1820 2.62E-24
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1847 1966 4.84E-37
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1504 1685 5.63E-36
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 774 858 9.4E-13
Coils Coil Coil - - 779 799 -
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1850 1961 1.8E-26
MobiDBLite mobidb-lite consensus disorder prediction - - 607 630 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1648 1666 1.0E-9
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 4.2E-7
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1215 1345 9.7E-31
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1850 1961 9.42951E-32
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1672 1685 1.0E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 631 766 3.1E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 773 903 1.4E-17
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 913 1039 1.3E-10
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1074 1172 3.7922E-13
Gene3D G3DSA:3.40.50.2300 - - - 1850 1969 8.4E-41
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1073 1208 2.2E-29
SMART SM00260 chew_2 IPR002545 CheW-like domain 1680 1824 6.4E-27
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1217 1310 1.7E-14
Coils Coil Coil - - 1467 1487 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 631 728 7.5E-8
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1215 1335 1.44E-28
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 632 760 0.0
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1215 1313 6.87052E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 631 754 8.44E-26
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 3.27E-21
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1592 1606 1.0E-9
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1848 1961 4.4E-35
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 774 844 1.00603E-8
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 770 867 1.2E-7
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 633 713 3.4E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 125 6.0E-10
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1547 1688 2.4E-24
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1363 1502 7.0E-12
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1551 1687 2.2E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 912 1034 9.42E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 553 3.49E-14
Coils Coil Coil - - 1387 1421 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1076 1176 1.7E-14
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1503 1687 2.8E-60
Coils Coil Coil - - 728 748 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 771 893 1.7E-20
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1501 1687 9.6E-52
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1074 1196 1.05E-28
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1215 1312 4.9E-8
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1693 1822 1.4E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.