Pseudomonas moraviensis R28-S, PMO01_24930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGTCTGTACTAATCCACAGACGTTCGTAGCAAGCTTCTTGCCTAAGCCCGGCCCTCAGCCGGGCTAATGGCATTTGCGTAAAACGCTTGATGCTTCAC CGTCGACGCCGCCGATGCGACCGAGACAAATCTGCTTCACCGCGTCAGGCCTGGCTCTTTTGCCAGCGGTGCACGTCTTTTCTGACGAGCCTTTCAAGGC TACTGACGAGCACACCCACTGATTCCTCTTACGACGATCAGCCCAAGGCACCTGCATGCGTGCCCGCTTTATTGAGCTATCCGAGGCCGACAACCGGCCG TCAGCGGATTCAGCGCAACACTTTCACATAGTCGAAGACTGATAGGTACTAACGTCAGTGGATTTTCGGCAGATACACTTCCCGACAGCGATCACGCAGA CGACACCGGTCGAGCCGCACTTTTTGTGCGTTTCCAGCAATGGCCCGCGTCCGACAGCCTGTCGCAACGGATTTATTGCAGCGCAGACGACGAGAACGCC
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| DNA Sequence for Gene |
>PMO01_24930
ATGGCCGGGCTGATTCCCCAGAGCTTCATTGACGACCTGCTGAACCGCACCGACATTGTCGACGTGGTCAGCTCGCGCGTGCAATTGAAGAAGGCCGGCA AGAACTACACCGCCTGCTGCCCGTTTCACAAAGAGAAAACCCCGTCGTTCAGCGTCAGCCCCGACAAGCAGTTCTATTACTGTTTCGGCTGCGGCGCTGG CGGCAACGCCCTCGGCTTTCTCATGGATCACGACAACCTGGACTTCCCCCAGGCCGTCGAAGATCTGGCCAAAGCCGCCGGCATGGAAATCCCCCGCGAA GAAAGCGGCCGCGAGCGTAAGCCGCGTCAGCCGACCGATTCGCCGCTGTATCCACTGCTCACCGCCGCCGCTGATTTTTACCGGCAGGCACTCAAGAGTC ATCCGTCGCGCAAGGCTGCGGTGGATTACCTCAAGGGCCGCGGCCTGACCGGCGAGATCGCTCGGGATTTCGGCCTCGGCTTTGCGCCGCCAGGCTGGGA CAACCTGCTCAAGCATCTGAGCAGTGACACGCTGCAACAGAAGGCCATGATCGAAGCCGGCCTGCTGATCGAGAACGCCGAAACCGGCAAGCGCTATGAT CGCTTCCGCGATCGCGTGATGTTTCCGATCCGCGACACCCGTGGACGGATCATCGCCTTCGGCGGCCGCGTACTGGGCGACGACAAGCCCAAGTACCTGA ACTCACCGGAAACCCCGGTATTCCATAAAGGCCAGGAACTCTACGGCCTTTATGAAGCACGCAAGAACAATCGCAACCTCGACGAAATCATCGTCGTCGA GGGTTATATGGACGTCATCGCCCTCGCCCAGCAAGGCTTGCGCAATGCCGTCGCCACGCTGGGTACCGCGACCAGCGAAGAACACCTCAAGCGCCTGTTC CGCGTCGTGCCGAACGTATTGTTCTGCTTCGACGGCGACCAGGCCGGCCGCAACGCCGCTTGGCGCGCACTGGAAGCGACCCTGCCGTGCCTGCAGGACG GTCGTCGCGCGCGGTTCCTGTTTTTGCCCGAAGGCGAAGACCCGGACACCCTGGTTCGCGCCGAAGGCACCGACGCATTCAAGGCGCGCATCAATCAGCA CGCGCAGCCGCTGGCCGATTATTTTTTCCAGCAACTGACCGAAGAATCCGACCCGCGCTCGCTTGAGGGCAAGGCGCACATGGCCACCCTTGCCGCGCCA TTGATCGACAAGGTGCCGGGAGCGAACCTGCGCATCCTCATGCGTCAGCGCCTGACCGAGATTACCGGCCTGAGCAGCGAGACCGTCAGCCAATTGGTTC AGAGTGCGCCGCAGGAAGCACCGCCCGCCTACGATCCGGGCTTCGATTACGACGCCATGCCGGACTACAGCGACTACCATCAGCCGCAGGCGCAGGACAT GTACGCGCCGCAGCAGGAATGGACGCCGAAGAAACCCGGCGCCGGCGGCAAGAAGTGGGACAAGAAACCGTGGGACAAGAACGGCAAGCGTGGTGGCGAT CGTGAACAGCAGCGCCCGCGCACGCCGATTGGCGTTGAATCGCCAACCCTGACGGCATTGAGAACATTGCTCCATCATCCGCAACTGGCCAAGCGCGTCG AGGACGCCGGGCATATTGCCGATGAAAATCAGACCAACGCCCAGTTGCTTGTGGCGCTGCTCGAAGCCGTACAGAAGAATCCCAAGCTAAACTCATTTCA GTTGATCGCGCGATGGCACGGCACTGAACAGGGTCGCTTGCTCAAGGCACTGGCCGAAAAGGAATGGCTGATTGACGGAGATAACCTTGAACAACAGTTT TTCGACACCATTACTAGCTTGTCCGCCCGCCAACGCGAGCGAAATCTCGAACAGTTACTCAGGAAAGCGCGGCAAAGCGAACTGAGCGTCGAAGAGAAAA ATCAACTGCGCGACCTTTTAAGTCGCAATGTTTCCGCATCAAACCCGACCTCAACTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCATAGCTCAGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATT ATTGAGTTGATCAAACTGGGTCGTGAGCAGAAGTATCTGACTTACGCCGAGGTCAACGACCACCTGCCCGAGGATATTTCAGATCCGGAGCAGGTGGAAG ACATCATCCGCATGATTAACGACATGGGGATCCCCGTACACGAGAGTGCTCCGGATGCGGACGCCCTTATGTTGGCCGACGCCGATACCGACGAGGCCGC TGCGGAAGAAGCAGCCGCTGCGTTGGCGGCGGTGGAGACCGATATCGGTCGCACCACCGACCCGGTGCGCATGTACATGCGTGAAATGGGTACGGTCGAG CTTCTGACCCGTGAAGGCGAAATCGAAATCGCCAAGCGGATCGAAGAAGGCATTCGTGAAGTGATGAGCGCGATTGCGCACTTCCCCGGCACGGTTGACC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFLMDHDNLDFPQAVEDLAKAAGMEIPRE ESGRERKPRQPTDSPLYPLLTAAADFYRQALKSHPSRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLSSDTLQQKAMIEAGLLIENAETGKRYD RFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRAEGTDAFKARINQHAQPLADYFFQQLTEESDPRSLEGKAHMATLAAP LIDKVPGANLRILMRQRLTEITGLSSETVSQLVQSAPQEAPPAYDPGFDYDAMPDYSDYHQPQAQDMYAPQQEWTPKKPGAGGKKWDKKPWDKNGKRGGD REQQRPRTPIGVESPTLTALRTLLHHPQLAKRVEDAGHIADENQTNAQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIDGDNLEQQF FDTITSLSARQRERNLEQLLRKARQSELSVEEKNQLRDLLSRNVSASNPTSTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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