Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGCCTTGGCTGCTCTGGCCGCAGCGCGTCACGTTGGCGTGGTGCCGTCCATGGGCATCGCCGGGTTGAGCGCGTTCAAGAACGTCAAACGACGCATGG AGAAAGTCGCCGAGGTGCGCGGCATCACCATTTACGACGACTTCGCTCACCACCCGACCGCCATCGCTACCACCCTCGACGGCCTGCGCAAACGCATCGG CGACGCGCCACTGATTGCGATCATCGAGCCGCGCTCCAATTCGATGAAGCTCGGCGCCCACCGTGACGGTCTGCCGGACAGCGTGGTCGATGCCGATCAG GTGATCTGGTATGCCCCGACCAACCTCGGCTGGGACCTCGGCGCCACCGCAGCGTTATGTACCGTGCCGTCAATCGTCAGCGATTCGCTGGAAGGCATCA TCGAACGCGTGAAGAGCCAGGCGCAGCCCGGCACCCACGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTCGCCGAGGCGCTGCA
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DNA Sequence for Gene |
>PMO01_24060
ATGAACACTTTTTCCCAGGCCGGCGGCCCGGAACGCATCACCCTGGCGATGACCGGCGCCTCGGGCGCGCAGTACGGTTTGCGCCTGCTCGATTGCCTGG TGCGCGAAGATCGCGAAGTGCACTTCCTGATCTCCAAGGCTGCGCAACTGGTAATGGCCACCGAGACCGACGTGTCCCTGCCGAACAAGCCGCAGATGAT GCAGGCCTTTCTGACCGAATATACCGGCGCCGCTGCCGGGCAGATTCGCGTGTATGGCAAGGAAGACTGGATGTCGCCGGTAGCCTCCGGCTCCGGCGCG CCGGCGGCCATGGTGGTGGTGCCGTGTTCGACCGGCACGCTGTCGGCGATTGCCACCGGCGCCTGCAACAACCTGATCGAACGCGCGGCGGACGTCACCC TGAAAGAGCGCCGTCAGTTGATTCTGGTGCCGCGCGAGGCGCCGTACTCGAGCATTCATCTGGAGCACATGCTCAAGCTGTCGAATCTGGGCGTGACGAT TCTGCCGGCCTCGCCGGGCTTCTATCACCAGCCGCAGACCATCGATGACCTGATCGACTTCGTTGTGGCGCGGATTCTCAATCTGCTCGGCATCCCGCAG GACATGCTGCCGCGCTGGGGCGAGCATCACCTGAGCAGCGATGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGCTGGTGCTTGTGCTGGCGCTGCAATTGGCTGGATGCGCTACCGTGCGCACGCTGGATGCAGCCAAACCCGGCGCACCGGTGGTGTATGCCGGGACG CGCCTGGATTTGTATGCGTTGAACGGCGGCTGCTGCGCCATGGACCGGTTCGGTGCCGAGGCGCCGAGCTATCCGGGAGTGGACCTGCCTGCCAGCGCGT TGCTCGACACGCTGTTGTTGCCGTTGTCGTTGCTCACCGTGATTGGCGTAGGCTTTCAAGCGACTGGTGGATTGTAGGGGGGGGGCGCACAACCTCTGTG GATTGTAGCGACTGATCGTTCCCACGCTCTGCGTGGTAACGCATCCTGTGACGCTCCGCGTCACGCTCTTCAGGACGCAGAGCGTCCATGGCTGCATTCC CACGCAGAGCGTGGGAACGATCATCATGGGCGGATGGATTATTTGCCGAGCTTGCGCAGCTCATCCGACTCGATCACCCGCACCCCATCCTGTTCTTCCA
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Amino Acid Sequence |
>aromatic acid decarboxylase
MNTFSQAGGPERITLAMTGASGAQYGLRLLDCLVREDREVHFLISKAAQLVMATETDVSLPNKPQMMQAFLTEYTGAAAGQIRVYGKEDWMSPVASGSGA PAAMVVVPCSTGTLSAIATGACNNLIERAADVTLKERRQLILVPREAPYSSIHLEHMLKLSNLGVTILPASPGFYHQPQTIDDLIDFVVARILNLLGIPQ DMLPRWGEHHLSSDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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