Pseudomonas moraviensis R28-S, PMO01_22980
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACGTGCGGCTAAACGGTTAAACGTCGACCCACACGCCTTGTGTATCTTCCCGGCATTCAATTGCCGTGAGCGACTGCCCGGCGCAGGGGCCGGCGACG CATTCGCCGTCCTCGATCAGAAACAGTGCGCCATGGGTAGCGCACTGGATCAGGCTATTGCTCGGATCGAGAAACTGGTCGGGCTGCCATTCCAGCCCGA CGCCCCGGTGCGGGCAGCGATTGAAATAGACAAACACCTTGCCGCCACGACGCACGGCAAACAGCTTTTTGCCTTCGATTTCGAAACCGCGACTGCCACC TTCGGCCAGCTCACTGTCGGCGCAGAGAAACTTCATGGCTATCCTCAAATGTCCGCTCGTGTCTGGATATGTCCGAGCTTGACGTTCAAATGCAAACAAT TATCAAATGGCGACCTTCTCCCACAGGGAGTCTGGCCGTTGCCGAGGATACTTGGCTCGCTGCGCCGATGCCCGGGAAACCTTGTTCAAGGAAGCTGCGT
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| DNA Sequence for Gene |
>PMO01_22980
ATGCGCCTGAAAACCCGCGTTGCCGTACTGTGCGTCGGCCTTTTTCTCAGCCATCAGGCGATCGCAGCGGATTTACCGCAACGCTGGGTCAGCGCCGGCG GTGCGCTGTCGGAATGGGTCAGCGCACTGGGCGGCGAATCGAAGCTGGTAGGGGTCGACACCACCAGTCAGCATCCCCAATCGTTGCAGGCGCTGCCGAG TATTGGTTATCAGCGCAGCCTGTCGGCCGAAGGCATCTTGAGCCTGCGCCCGGACATTCTTGTCGGTACCGAAGAAATGGGGCCGCCGCCGGTTCTGGCG CAAGTCAAAGCCGCCAAAGTGAACGTCGAGCTGTTCTCGGCACAGGCTGATCTGCCGACGCTGGAAAAGAATGTCACTCGTTTGGGCCAGTTGCTCGGCG CACAAAGCCAGGCAGCGCAGCTGCTGCAGAGTTATCAACAGCAGCTCCAGGCGCAGAAAGCGCGCGTTGCCCAAGTGCAGGCCACGCAGAAAGCTCCGGG CGTGTTGCTGTTGCTTGGGCACGCCGGCGGCAAGCCGTTGATCGCCGGCAAGGACACCGCCGCCGATTGGTTGCTGCAACAGGCTGGCGGGCACAACCTT GCGACGCATAGCGGCTACAAACCGTTTTCTGTCGAATCCCTCGCCAGCCTTGATCCCGAAGTGCTGGTGTTTGCCGACCGTGCGCTGACCGGCGAGGCCG CAAAAGCGGCATTGTTCAAGGAAAACCCCATCCTCAATTCCAGCCGGGCGGCGAAGAGCGGGCGGGTGATGGAGCTGGATCCGACGCTGCTGGTTGGCGG CCTCGGGCCACGGTTGCCGGCTGCTTTGCAAACCCTGACTGACGGCTTCTACCCGGCCAAGGGCGGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCACACTGGTCAAACCCCGTGGCCTGTTTATCGGCCTGACATTGCTGTGTCTGCTCGCGATCTGGCTGTCGCTGGCGCTGGGGCCGGTGAGCCTGCCGCT GTTCGATACCTTGCGCGCGGCGCTGCGTCTGATCGGCGTGCCGTTGGCGCCGCAAGGTCTGGAGCAGGCTGAGCTGATTCTCGGCCAGATCCGCCTGCCG CGAACCTTGCTCGGCTTGGCGGTCGGCGGCGTGCTGGCGCTATCCGGGGTAGCGATGCAGGGCTTGTTTCGTAATCCGCTGGCCGATCCGGGGCTGGTCG GGGTGTCCAGTGGCGCGGCACTTGGCGCGGCGATTGCGATTGTCGGCGGTTCGTTATTCGGCGGCCTGCCGGAGTGGTTCGGGCCGTATCTGTTGTCGGT GTGTGCGTTTCTTGGCGGGCTCGGGGTGACGGCGCTGGTCTATCGGCTGGGCCGGCGCAACGGTCAGACTCACGTCGCCACCATGTTGCTGGCCGGTATC
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| Amino Acid Sequence |
>Heme-transporter PhuT
MRLKTRVAVLCVGLFLSHQAIAADLPQRWVSAGGALSEWVSALGGESKLVGVDTTSQHPQSLQALPSIGYQRSLSAEGILSLRPDILVGTEEMGPPPVLA QVKAAKVNVELFSAQADLPTLEKNVTRLGQLLGAQSQAAQLLQSYQQQLQAQKARVAQVQATQKAPGVLLLLGHAGGKPLIAGKDTAADWLLQQAGGHNL ATHSGYKPFSVESLASLDPEVLVFADRALTGEAAKAALFKENPILNSSRAAKSGRVMELDPTLLVGGLGPRLPAALQTLTDGFYPAKGGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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