Pseudomonas moraviensis R28-S, PMO01_21785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGGTGGGAGTTGGGACGGACTGGCATGTGAGCTTCCTTGCATGTGCTCCTGGCTTTTTCAAAGGTTAGTGGTTGGCCGCCCCGGTCGGCGCTGCAACT GTTGAGCGAAATTTCTGAATCCGTCGGACGATTTATCCGTGATCAAGCGAGGCGAGACATCACACAGTGGATCAAATGCCCTAAGGCTGAAACATGACGC TGCACCATCGCTGTGCAATACTTCGCGGCTTTTTCAGTGACGACTTTTCCTACGTAATGCAGGTAATGCCTCTCCGCAGAACCCACTATTGCCGAGAGTT GTCGCTGAATGTTGTGACTTTTAGAGTGAAAAATCCTGCCCTGAGCTTTTTATACTGCACGCCCCGCTGATCTTTCAGGCCCGCCCTGCAAGACGCGTCT GCCCACGAAGCCGACGCGGTTTCCTGCCCAGCCAAGGCCTATCGGCCGACGCTTCGAAACCCGGTGGTCATATCCAATAACAAGACGAGGTTGTACCCCT
|
|
| DNA Sequence for Gene |
>PMO01_21785
ATGCCAGTTGGCAATCCTCTGCCGCACGGCGACACCGCTTCGGGCGGTCCGCTCAAACGAGAACTCGGCGAACGGCATATCCGCCTGATGGCGCTCGGTG CCTGTATCGGCGTCGGCCTGTTTCTCGGCTCGGCCAAAGCCATCCAGATGGCCGGTCCGGCGATCATGCTTTCCTACATCCTTGGCGGTCTGGCGATCCT GGTGATCATGCGCGCACTCGGCGAAATGGCCGTGCATAACCCAGTAGCCGGTTCGTTCAGCCGCTACGCGCAGGACTATCTCGGTCCGCTGGCAGGCTTC CTCACCGGTTGGAATTACTGGTTTCTGTGGCTGGTCACCTGCGTCGCGGAAATCACTGCGGTGGCGGTGTACATGGGTATCTGGTTCCCGGATGTGCCGC GTTGGATCTGGGCCCTGGCGGCGTTGATCAGCATGGGCTCGATCAACCTGATCGCGGTAAAAGCCTTCGGCGAGTTCGAATTCTGGTTCGCCCTGATCAA GATCGTCACCATCATCGCCATGGTCATCGGCGGCGTCGGCATCATCGCCTTCGGTTTCGGCAATGATGGCGTGGCGCTGGGCATTTCCAACCTGTGGGCG CACGGCGGTTTCATGCCCAACGGCGTGACCGGTGTGCTGATGTCGCTGCAGATGGTCATGTTCGCCTACCTCGGTGTCGAGATGATCGGCCTCACCGCCG GTGAAGCGAAGAACCCACAGAAGACCATTCCTGACGCGATCGGCTCGGTGTTCTGGCGGATCCTGCTGTTCTACGTCGGCGCGCTGTTCGTAATCCTGTC GATCTACCCGTGGAATGAAATCGGTACCCAGGGCAGCCCGTTCGTGATGACCTTCGAGCGGCTGGGCATCAAGACCGCAGCCGGTATTATCAACTTCGTG GTGATTACTGCGGCGCTGTCGTCGTGCAACGGCGGCATCTTCAGCACCGGGCGCATGCTCTACAGCCTGGCGCAGAACGGCCAGGCCCCGGCCGGTTTCG CCAAGACCTCGAACAACGGCGTGCCACGCCGCGCGTTGTTGCTGTCGATTGCGGTGTTGCTGTTGGGTGTAGTGCTCAACTATCTGGTACCGGAAAAGGT CTTCGTCTGGGTCACCTCGATTGCCACCTTCGGTGCGATCTGGACCTGGGTGATGATCCTCCTCGCCCAGCTGAAATTCCGCAAAGGCCTGAGCGCCAGC GAACGTGCCGGCCTCAAGTACAAGATGTGGCTGTACCCGGTCAGTTCATATTTCGCCCTGGCGTTTCTGGTACTGGTGGTCGGCCTGATGGCGTACTTCC CGGATACCCGCGTGGCGCTGTATGTCGGGCCGGCGTTCCTGGTGTTGCTGACGGTGTTGTTTTACGTGTTCAAGTTGCAGCCTAACCAAGTTTCGCAAGA CGCGGTGCGTTCGATTTCGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATTCAAGCCGCTGAAAAAAACAAAGCCCCGGTCGCAAGATCGGGGCTTTTTTGGTTCACGCGAGCTGATCGCCAGTCTTACGCCGCTACCACTTCCTGCG GCTCAAAACTGTCCGCCCGCGCCATCTGCCACATCCGCGAATAGAACTCGCCATTCACTTCGCCAATAAGCAATTCCCCCGGTTTCAGAAACACGTGCAG CTGCGAAAACAGTTTGATCTCGGTTGCCGACATGCGACGCACCAGATGCTTGGCCGACAGTTGCGAAGGATGATCAAGCCCGGCAGCAGCGAGCATCTCC GCCAGCGCTTTGAGCGTGCTGCGATGGAAGTTGTAGACGCGCTGGGCCTTGTCCGGCACCACCAGAGCGCGTTGGCGCAGGGCGTCCTGGGTGGCGACGC CGGTCGGGCATTTGTTGGTGTGGCACGACTGTGACTGGATGCAGCCGATGGCGAACATGAAGCCGCGCGCCGAGTTGGCCCAGTCGGCGCCAATGGCCAA
|
|
| Amino Acid Sequence |
>alanine glycine permease
MPVGNPLPHGDTASGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIQMAGPAIMLSYILGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGF LTGWNYWFLWLVTCVAEITAVAVYMGIWFPDVPRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISNLWA HGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPDAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFV VITAALSSCNGGIFSTGRMLYSLAQNGQAPAGFAKTSNNGVPRRALLLSIAVLLLGVVLNYLVPEKVFVWVTSIATFGAIWTWVMILLAQLKFRKGLSAS ERAGLKYKMWLYPVSSYFALAFLVLVVGLMAYFPDTRVALYVGPAFLVLLTVLFYVFKLQPNQVSQDAVRSIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|