Pseudomonas moraviensis R28-S, PMO01_21455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAACCCGCTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCTTACTACATCGACTACCGCAACCTGCGTCCGAAGTACGTTG AAGCGTTCTGGAACCTGGTCAACTGGAAGTTCGTGGCCGAGCAGTTCGAAGGCAAAACCTTCACCGCTTAAGCTGCGCGCCCGATGAAAAGCCCGGCTTC GGCCGGGTTTTTTTATGCCCGACGCATGGCGTTTCTCGCACGGTAAAAGCAGCTTCACGCCGTTTGCCGCCAGCCCCCAGCCGTCTACCATCACAGAAAG GAAAAAATCTTTGGCCCAGTGCTCAAGTTGAAGGCAATTGCAACCGACACAGTTAATTCAGAGCTATTACTCAAATGACGACATTGCGGCCAGGATCACG GCGACTTTTCCCGTGCCTGATTGTCCCTTTGACTGCCAACCCGGGATTGCCAATACTCATGGCAACTTGACGCTACCCGCACGGAACAAGGAATAACCCT
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| DNA Sequence for Gene |
>PMO01_21455
TTGAAGCTGGAACTCAAGAACAGCTTGTCGGTGAAGTTGCTCCGGGTCGTGCTCCTGTCGGCATTGATCGTAGGCGTAGTCTTGAGCTGCGCGCAGATTG TCTTCGATGCCTACAAGACCCGTCAGGCGGTTGCCGGCGACGCCGAGCGCATCCTCGACATGTTCCGCGATCCATCGACCCAGGCCGTGTACAGCCTGGA TCGGGAAATGGGCATGCAGGTGATCGAAGGGCTGTTTCAGGACGACGCCGTGCGTCAGGCCTCGATCGGCCATCCCAACGAAGCCATGCTGGCGCAGAAA TCCCGCGAGCTGCAGCATTCCAACAGCCGTTGGCTGACCGACCTGATTCTCGGCCAGGAACGCACCTTCACCACGCAGCTGGTCGGCCGTGGCCCTTACA GCGAATACTACGGCGACCTGAGCATCACACTCGACACCGCCACTTATGGCGAAGGTTTCATCGTCAGCTCGGTGATCATTTTCATTTCCGGCGTGCTGCG CGCACTGGCGTTGGGCCTGGTGCTGTATCTGGTCTATCACTGGTTGCTGACCAAACCGCTGTCACGAATCATCGAGCACCTCACCGAGATCAACCCCGAT CGTCCCAGCGAGCACAAGATTCCGCAGATCAAGGGCCACGAAAAAAACGAGCTGGGCCTGTGGATCAACACCGCCAACCAGTTGCTCGAGTCCATCGAAC GCAACACCCACCTGCGCCACGAAGCGGAAAACAGCCTGCTGCGCATGGCCCAGTACGACTTCCTCACCGGTCTGCCGAACCGCCAGCAATTGCAGCAGCA ACTGGACAAGATTCTCGTCGATGCCGGCAAGCTGCAGCGCCGCGTCGCCGTGTTGTGCGTCGGCCTGGATGACTTCAAGGGCATCAACGAGCAATTCAGC TACCAGACCGGCGACCAATTGCTGCTGGCCCTGGCCGATCGCTTACGTGCCCACAGCGGTCGTCTCGGCGCCCTCGCCCGCCTCGGCGGCGATCAGTTCG CGCTGGTGCAGGCCGACATTGAACAGCCTTATGAAGCTGCAGAACTGGCGCAGAGCATTCTCGATGACCTTGAGGCGCCCTTCGCCCTCGACGATCAGGA GATCCGCCTGCGCGCGACTATCGGCATCACCCTGTTTCCGGAGGACGGCGACAGCACCGAGAAGCTGTTGCAGAAAGCCGAACAGACCATGACCCTGGCC AAGACCCGCTCGCGCAATCGCTATCAGTTCTACATCGCCAGCGTCGACAGCGAGATGCGCCGTCGTCGCGAGCTGGAAAAAGATTTGCGCGATGCGCTGA TCCGCGACCAGTTCTACCTCGTCTACCAACCGCAGATCAGCTATCGCGATCACCGCGTGGTCGGCGTCGAAGCGCTGATTCGCTGGCAACATCCGGAACA CGGTCTGGTGCCGCCGGACCTGTTCATCCCGCTGGCCGAACAGAACGGCACGATCATCGCGATCGGCGAGTGGGTGCTCGATCAGGCCTGCAAGCAGTTG CGCGAGTGGCACGATCAGGGTTTTGTCGATCTGCGCATGGCGGTCAATCTGTCCACCGTGCAACTGCACCACGCCGAGCTGCCACGGGTGGTCAACAACC TGCTGCAAATGTACCGCTTGCCGCCGCGCAGTCTGGAACTGGAAGTCACCGAAACCGGCCTGATGGAAGACATCACCACCGCCGCCCAGCATCTGCTCAG CCTGCGCCGCTCCGGTGCGCTGATTGCGATCGACGACTTCGGCACCGGCTATTCGTCCCTCAGTTATCTGAAAAGCCTGCCGCTGGACAAGATCAAGATC GACAAGAGCTTCGTTCAGGACCTGCTCGATGACGACGATGACGCGACCATCGTTCGCGCGATCATTCAGCTGGGCAAGAGCTTGGGCATGCAGGTGATTG CCGAAGGCGTGGAAACCGCCGAGCAGGAAACCTACATCATTTCCGAGGGTTGCCACGAAGGTCAGGGCTACCACTACAGCAAACCGCTGCCGGCGCGGGA GCTGGGCATTTACCTCAAGCAGGCGCAACGCAGCAACGCGGCTATTTTATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATCAAAAGATCGCAGCTTTTTTATAAAAGCAAAGATCGCAGCCTTCGGCAGCTCCTACATTTGAAATGCGTTCCCCCTGTAGGAGCTGATGAGTGAAAC GAGGCTGCGATCTTTTGATCTTCTTGCGCAAATAAGAAATATTTCCAAGCACGCCTTTACACATAATGCGAAAGATTTGCATTATGTCGCAGTTTTGCGC GCCCCCGGCGCCAGTCCACTCAACTACCGAAGCAGGATGTTCGCCATGATTCGTATGCCTCTGGCTACCGCCAGTCTGCTGGCCATCGCTATTTCCCTCG CCGGTTGCGGCGAAGGCAAGGACAAAGAAAAAGCCTCCGAAATGACTCCGGCTTCCAGCAGTGCTGCTCCAGCCCCTGCCGCTGCACCTGCTCCTGCCGC CGGTAAAGTTGACGATGCCGCCGCCAAGGCTGTGGTCGCGCACTACGCCGACATGGTCTTCGCCGTTTACAGCGATGCCGAATCCACCGCGAAAACCCTG
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| Amino Acid Sequence |
>diguanylate cyclase
MKLELKNSLSVKLLRVVLLSALIVGVVLSCAQIVFDAYKTRQAVAGDAERILDMFRDPSTQAVYSLDREMGMQVIEGLFQDDAVRQASIGHPNEAMLAQK SRELQHSNSRWLTDLILGQERTFTTQLVGRGPYSEYYGDLSITLDTATYGEGFIVSSVIIFISGVLRALALGLVLYLVYHWLLTKPLSRIIEHLTEINPD RPSEHKIPQIKGHEKNELGLWINTANQLLESIERNTHLRHEAENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGKLQRRVAVLCVGLDDFKGINEQFS YQTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAPFALDDQEIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLA KTRSRNRYQFYIASVDSEMRRRRELEKDLRDALIRDQFYLVYQPQISYRDHRVVGVEALIRWQHPEHGLVPPDLFIPLAEQNGTIIAIGEWVLDQACKQL REWHDQGFVDLRMAVNLSTVQLHHAELPRVVNNLLQMYRLPPRSLELEVTETGLMEDITTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIISEGCHEGQGYHYSKPLPARELGIYLKQAQRSNAAIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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