Pseudomonas moraviensis R28-S, PMO01_21180 (sbcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGATGGCAAACAGCAGCAAGGAACCGAGGCCCATGCCGAGCTTGCCGAGAAATGCCAGCGCGATGAACAGCACGCCGAGGATCAAGCCGCGAATGCCCA GATCGATGGCAAACGCCACCGCGCGCACCATCAACCCGGCGGGGCGCAACGGCAGGTCGATGCCTTCCGGCGTTTCGACCTGATGGCGCGTATCCAGCGG TGCTTTCCTTCGCGGTGCTGTGGGCTCGAGCATGGGCTACCTGATGTTCGCCTGTTCGGGGTGCAAGTGCGCCTGATGCTAGCAGCCTCTCGGGTGTGGG AGCGAGCCTGCTCGCGAATGTGGTGGGTCAGTCAGCCTGTGGGCAACTGACAGAACGCCTTCGCGGGCAGGCTTGCTCCCACAAGGGCAATCCATTCCAG TTGTAGGAATCTGGAGAAATTGCTGTTCTAGGGCGACCAGGCTGGCCGTGGCAGCCCTGAAACGCCTAGACTTCGCCGATCTTCTGTTCAGGATTCGCCC
DNA Sequence for Gene
>PMO01_21180 |sbcB
GTGACTTCAATCTTCTGGTACGACTACGAAACCACTGGCATCAATCCGCGCAACGACCGACCGCTGCAAGTGGCCGGGATTCGCACCGACCATGCGCTCA ACGAAATCGACGAGCCGGTCAATCTCTATTGCCAGCCCAGCGAAGACATCCTGCCGCACCCGGCGGCGTGCGCGATCACTGGCATCACCCCCGGTCAGCT CGCTGAAAAAGGCTTGAGCGAAGCCGATTTCATGACTCGCGTGCATGCGCAACTGGCCACACCGGGGACCTGTGGCGCCGGTTACAACACCTTGCGTTTC GACGATGAGATGACTCGCTACAGCCTGTATCGCAATTTCTTCGACCCCTACGCCCGTGAATGGCAGGGTGGCAACAGTCGCTGGGATCTGATTGATGTGG TGCGCGCCGCTTACGCATTGCGCCCGGACGGTCTGGTCTGGCCGACCGATGATGAAGGCCGCGTGACCCTCAAGCTTGAACGCCTCACGGCGGCCAACAA TATCGATCACGGGCACGCTCACGAAGCCCTGTCGGATGTGCGCGCCACCATTGCGTTGGCGCGGCTGATTCGCGAGAAACAACCCAAGCTCTACGAGTGG CTGTTCCAGTTGCGCAGCAAACAGAAGGTGATGGATCAGATCCGCCTGTTGCAGCCACTGGTGCATGTGTCCGGGCGTTTCTCGGCGGCGCGCAGTTATG TCGGCGTGGTGCTGCCGCTGGCCTGGCACCCGAAGAATCGCAACGCTCTGATCGTCTGTGATCTGCATCGTGATCCGCAGGGGTTGCTGGACCTCGATGC GCAAGCCCTGCGTCAGCGTCTTTATACCCGTCGCGATGAGTTGGCCGAAGGCGAACTGCCAGTGCCGCTCAAGCTGATTCATATCAATCGCTGCCCGGTT GTAGCGCCGCTGGCGGTATTGCGCGCGCAAGACCAGCAGCGCCTTGGGCTGGACATGGCGCTTTATCAGGAGCGGACAGTGCGACTAACTGACGCACAAC AAGTCTGGAAAGATAAAGTCGCGGCGATTTATGCCAGCGAAGATTTCACTCCCAGCGAAGATCCCGAGCAGCAGTTGTACGATGGATTTATCGGTGATCG TGATCGTCGTTTATGCGAACAAGTTCGAACGGCCGACCCTGCGCAATTGGCGCAAGAGCAGTGGCCTTTCGATGATGAACGTTTGCCTGAATTACTTTTT CGATATCGAGCACGCAACTTTCCGGACACCCTGGATGTGGCCGAACAAGAGCGCTGGAAATTATTTTGTCAGCAGCGCCTGACGCAACCCGAGGCAGGTG CGCCGAATACCGTGCAGTCATTTATCGAGGCCGCCGAGCAATGGTCGCTTAGTGCGTCACCGATGCAGCGAGAGGTGCTCAATGACTGGCAGAATTATGT CCAGGCATTACGCAAACGTTTGAATCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATCGAACATGCCCGGACAATAAATTACGGGCATAAAAAAACGCCAGCGCTGGCTGGCGTTCTTTTGTTCGCGGATCGCTCTGCGAAGGCGTCGCGGCTT AGCCCAGCAGGGTAGCCCAGCCTTCAACCACGTCGCCGCCCCACTTGGCTTTCCACTCTTTCAGAGTTTTGTGGTTGCCACCTTTGGTTTCGATGACTTC ACCGTTGTGCGGGTTTTTGTATTGCTTAACTTTGCGTGCACGCTTGGTGCCGGTAGTTTTTACTGCGCCGCCACGTGGAGCCTTGGATTTGGCTTCTGGA TCCAGCAGCGCGATGATGTCACGCAGCGACTTGGAGTATTCACCCATCAGCGTGCGCAGTTTGCCTTCGAATTCCAGTTCGGCTTGCAGTTTGTCGTCTT CGGACAGGTTCTTCAGACGGGCTTGCAGCTCTTTGATGGCTTCTTCGGTGGCGCGATATTCGTTGATCAAGGACATGAGTACTACCTTTTGTAGAATGCT
Amino Acid Sequence
>exonuclease I
MTSIFWYDYETTGINPRNDRPLQVAGIRTDHALNEIDEPVNLYCQPSEDILPHPAACAITGITPGQLAEKGLSEADFMTRVHAQLATPGTCGAGYNTLRF DDEMTRYSLYRNFFDPYAREWQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANNIDHGHAHEALSDVRATIALARLIREKQPKLYEW LFQLRSKQKVMDQIRLLQPLVHVSGRFSAARSYVGVVLPLAWHPKNRNALIVCDLHRDPQGLLDLDAQALRQRLYTRRDELAEGELPVPLKLIHINRCPV VAPLAVLRAQDQQRLGLDMALYQERTVRLTDAQQVWKDKVAAIYASEDFTPSEDPEQQLYDGFIGDRDRRLCEQVRTADPAQLAQEQWPFDDERLPELLF RYRARNFPDTLDVAEQERWKLFCQQRLTQPEAGAPNTVQSFIEAAEQWSLSASPMQREVLNDWQNYVQALRKRLNL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site