Pseudomonas moraviensis R28-S, PMO01_20545
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCGGCTTCGGTCGGGCTCAGTTGTGTCTGGAGCCGCGAAAAAGGCTTGCAAAACACTAGATATAGTGAAAAACCTGCTTTTCTGGCTATTTTTTAA ACAAAAAAACACCTGCCAAAAAATTAACGAAAAAAAATCTGCTCGGGTCGATTCCGCGCAAAGCCCTGTAATCCCTCGGTCGGACCGAAATCCACCCCCT CCTCGGCCTCGCCATGAGCCGATTCGCCGCACCACGCCGGTAAAAATTTCCCTATAATGCCGCCCTATACGGGTCAGCAATATTCCCTTACAGGGAGCAA AAGCCATTCTGAAGCCCCGCAACAGTGCCAGACGCTGATTGCGCCCATCAGAGGCTCTCGGAACCCGTCAAAATTTCTGTTTATTTGCCTGCGTGCAGCG CTGCAAAAAACGACATCCAACGCGGCTTGTTTGGCCGTGTGAAAAACCAACCCTTCAGGTTTCACACGGGCACAAGCCCTCACGCAGGAGACGACACGTC
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| DNA Sequence for Gene |
>PMO01_20545
ATGCTGAGCTGGGACGAATTCGATAAAGAAGACAGTGAAGTCGCAACCGTGAAAGGCGCCAACGCCGGCCACGCAAGCGAAGCCAACATGGACCGCCTCG ACAACGCCGGCGGCGCCGCAGCGCTGGAAGCCCGCGCCGTCACCGCCGACGACTCGGCCGCCGTCGCCCGCGCCAAGGCTGCACTGAACTCCCTCGACGT CGCCGAAGGCCTCGCCGAACTCGAAGGCGCCTCCGCTCGTGTCGCCGTTGACGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAACTCGTGCCA TTCAAGTACGACTGGGCCTGGCAGAAGTATCTGGACGGTTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAA ACCCGGAAGGCCTGACCGACGACGAGCGCCGCATCGTCATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTTGCCAACAACCTGGTCCTGGC CGTGTACCGCCTGATCACCAACCCGGAATGCCGCCAGTACATCCTGCGCCAGGCTTTCGAAGAAGCGATCCACACCCACGCCTACCAGTACTGCATCGAA TCGCTGGCCATGGATGAAGGCGAAATCTTCAACATGTATCACGAGATCCCATCGGTCGCGAAGAAAGCAGCCTGGGGCCTGAAGTACACCCGCTCGATCT CCGATCCGAAGTTCGAAACCGGCACCCCGGAAACCGACAAAGAGTTGCTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAAATCCTCTCCATGGGCCGCCGCAACAAAATGACCGGCGTCGCCGAGCAGTTCCAATACATCCTGCGCGACGAATCCATGCACCTGAAC TTCGGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCATTTGTGGGATGCTGAGATGAAGGAAGAAGCGACCCAGATGATTCTGCAGGGTACCC AGCTGGAGATCGAATACGCACGCGACACCATGCCTCGCGGCGTACTGGGCATGAACGCGGCGATGATGGAGGATTATCTGAAGTTCATCGCTAACCGTCG TTTGAGCCAGATTGGTTTGAAGGAAGAGTACCCAGGGACGACTAACCCGTTCCCTTGGATGAGCGAGATTATGGACTTGAAGAAAGAGAAGAATTTCTTT GAGACGCGCGTGATCGAATACCAAACTGGTGGTGCTCTGAGCTGGGACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGTCTCGCTTGGCATGATTTGACGATTGCTGCCTGAGTCGACAAGTCGAGAAAGCAAAAAGCCCCGATCTGATCGGGGCTTTTTTATGGGCGATCGGTG AGCCTTTTTACGCCTACGTCACAGCGCTCAATCTCCTACAGCACTTACAGTCGCTTCCCATTGAAGCCTGCTGCGAGCGCTACTAAGCTCTGTGGCAGGT GCCTAAGAAACGCCCAACGTAGAAAGCTTCGTCAGTGACACAGACGCGTAATTCGTCGGTGACAACTGCTCTGCTCGTTGGGATTTTTTAAGTCCGCTCT ACGTTGGGGTCAGGCCCGCCCAAAATCCATAACGTAGAGGTCATAGATATGTCGGATCCATGCTCGGTAACTGTTTTCTCTCGCCACAACCTTTCTCTAC ATGCCCTTCTACTCGAAAATCAGCCATGGTTCTCCGCCCGGGATGTTGGCCGTTTGATGGGCTTCCACCTGAATGATCGGGTGGCCCACAAGCTAGATAG
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDSEVATVKGANAGHASEANMDRLDNAGGAAALEARAVTADDSAAVARAKAALNSLDVAEGLAELEGASARVAVDEKRMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTPETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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