Pseudomonas moraviensis R28-S, PMO01_20240
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAGGTTCGCGGCCTACACGCGTTTTCCCTGTTTCTTACACAAATTACGCACAGGCTTATCCACAGGTAGTACGTTGCAATCCCCCCCTGAAACGCATT ATCTTGTAGCACGGCGAAAACAGAGACCCTACATATAGGGTTTTCACCTAAAACGCCCAACCACATTTCAGACCTGAAACTCAAGTGCTTTATGGCCAGT TTCCGGTAGAACAAGCGAGTTTTTTCAAGCCCAAACCGCACTGGCGGATGGCACCGTTTTATTTGGTCCGAAACGGACAAAACGGTATGGGTGTTGCAGT CATGACTGCCACCCGCGAAGGAATCCGGTGGCGAGCTTCGGCTCGTAACCAAAACTTCGGCAAGGATGCGGCGTTGCAGCCTTTTTCCTACTGTTCCGAA GTTTGTAATGCCGACGCCCGTCGGTTGCAGTGCTTCGGTACAGAACGGTGAGCACCATGACGGTGCCAAACAAACATAGAGAATGTGGAGACCACCCCCC
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| DNA Sequence for Gene |
>PMO01_20240
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGGCACCTTGCCGCAGGCCGCCGATTCGACTTCGGATCTGGCAGCCACCGCGCCTGGCCAGCTGCGCG TGATCAAGCGTAATGGCACTGTCGTTCCTTACACCGATGACAAGATCACCGTCGCTATCACCAAAGCGTTCCTCGCAGTTGAAGGCGGCACCGCTGCCGC CTCGTCGCGAATCCACGACACCGTTGCGCGCCTGACCGAACAGGTCACCGCGACCTTCAAGCGTCGCATGCCATCGGGCGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGTGAGCAGAAAGTTGCACGCGACTACGTGATCTACCGTGACGGCCGTTCGAAAGAGCGCGCAG CGCACGCTCCTGCCGAAGCAGCAGTCAACGCGCACCCGTCGATCCGCATCACCCGCGCCGACGGCAGCCTCGCGCCGCTGGACATGGGCCGCCTGAACAC CATCGTCACCGAAGCCTGCGAAGGCTTGGAAGAAGTCGACGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCCTGACCGAC GTCAACACCGCGCTGGTGATGACCGCCCGTACCCTGGTTGAGCGCGAGCCGAACTACTCGTTCGTTACCGCCCGCCTGCTGATGGACACCCTGCGTGCCG AAGGCCTGAACTTCCTCGAAGTCGCCGAAAGCGCCACCCATCACGAAATGGCCGACCTGTACGCCAAGGCCCTGCCGGCCTACATCGCCAAAGGTATCGA GTTCGAACTGCTGAACCCTGTGCTGGCCACCTTCGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGATCAGCAATTCACCTACCTGGGCCTG CAGACCCTGTACGACCGTTACTTCATCCACAAGGATGGCGTGCGTTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGTCTTGCGATCGAAG AGAAGCAGAAAGAAGACCGTGCGATCGAGTTCTACAACCTGCTGTCCTCGTTCGACTACATGGCTTCGACCCCGACCCTGTTCAACGCCGGTACCCTGCG TCCACAGCTGTCGAGCTGCTACCTGACCACCGTGCCGGATGACCTGTCGGGCATCTATCACGCGATCCACGACAACGCCATGCTGTCGAAATTTGCCGGC GGCCTGGGCAACGACTGGACGCCGGTTCGTGCGCTGGGTTCGTACATCAAGGGCACCAACGGCAAGTCGCAAGGCGTTGTGCCGTTCCTAAAAGTAGTGA ACGACACCGCTGTGGCCGTGAACCAGGGTGGCAAGCGCAAAGGCGCTGTGTGTGCCTACCTGGAAACCTGGCACATGGACATCGAAGAGTTCATCGAGCT GCGCAAGAACACCGGTGATGATCGTCGTCGTACCCACGACATGAACACTGCCAACTGGATCCCTGACCTGTTCATGAAGCGCGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCATCCGAAGTACCGGACCTGCACGACCTGACCGGTAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCGCTGACCGAGTACC CGGGCAAGGTCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAGATGCTGTCCATGCTCTTCGAAACCGGCCACCCATGGCTGACTTTCAA AGACCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTCGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAAATC GCCGTTTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGACGGCAAGCTCGATACCGCCAAGCTGCAACGCACCGTGAACACCGCCGTGCGCA TGCTCGATAACGTGATCGACATCAACTACTACTCGGTGCCGCAAGCGAAGAACTCCAACTTCCGCCACCGTCCGGTCGGTCTGGGCATCATGGGCTTCCA GGACGCTCTGTACCTGCAGCACATCGCCTACGGCTCCGACGCCGCCGTCGAGTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTACGCGATTCAGGCT TCCTGCGACTTGGCCGACGAGCGCGGCGCCTACGAGACGTTCAACGGCTCGCTGTGGTCCAAGGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCG AGCAGCGCGGCGAGAAGTACATCGACGTCGACCTGAAGGAAACCCTCGACTGGGCACCGGTTCGCGCCCGTGTACAGAAAGGCATCCGTAACTCGAACAT CATGGCCATCGCACCGACCGCCACCATCGCCAACATCACTGGCGTTTCGCAGTCGATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCG GGCGAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTGAAGGCTCGCGGTCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTT CGGTGCAGCAGATCGAGCGCATCCCGCAAGAACTCAAAGAGCTCTACGCGACCGCGTTCGAAGTGGACACCAAGTGGATCGTTGACGCCGCCAGCCGTCG TCAGAAGTGGATCGACCAGGCCCAGTCGCTGAACCTTTACATCGCCGGCGCATCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTACCGTGGT CTGAAAACCACCTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGTAAGCTGAACGCTGTTTCCAGCGGCGGCAACC ACGGCGACGATTCGGTCCTGGCCGCTCCGGCAGGTCCGGCGCCAGTGCCAAAGGCCTGCGCGATTGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGAGCTGATTCAGGCGTTGCGAGACGCCTGGAATCTCAAGGCAAACAAAACCCCCGACAGACTTCTGGTTTGTTGGGGGTTTTGTTTTTTGGCGGCCT TTGGGCCGACCGGGCTCTTGAGGTTTTGGGTGTATATCCGTTGCTGCGGGTGTTGCCGCTGGCGGTTTCGCTCTTACAGCGAGTCACCTTTTTCAGACGC CGGAGTGCCGACCCAGCAAAAAGGAATCAAAAGGCTTTGCCCCGGCGTACGGCGCTCGCTGAGGCAAAACATCAAGAGCCCCTCACCCTAGCCCTCTCCC GGAGGGAGAGGGAACTGACCGAGGTGTTTAATCGAAGTACGCCGACCTGAGATACCGAGTCGAATGCAGGTTTTAAACACCACACAAATCGGCCCCCTCT CCCTCGGGAGAGGGCTGGGCGGGCGGCGTTCCGATGAGGGGCGAATCCAACACAGATCCAAAGCAGACCCCACGATTTTCACCACTCAAAACGATGAGCG
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| Amino Acid Sequence |
>ribonucleoside-diphosphate reductase
MQTDTTRENPQGTLPQAADSTSDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDGRSKERAAHAPAEAAVNAHPSIRITRADGSLAPLDMGRLNTIVTEACEGLEEVDGDLIQRETLKNLYDGVALTD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLNFLEVAESATHHEMADLYAKALPAYIAKGIEFELLNPVLATFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEI AVCNLGSINLPNHIVDGKLDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFRHRPVGLGIMGFQDALYLQHIAYGSDAAVEFADKSMEAVSYYAIQA SCDLADERGAYETFNGSLWSKGILPLDSQQILIEQRGEKYIDVDLKETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLS GEFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRG LKTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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