Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCAACGCCGGCCAAGTAAACTATGCAGCCGCCAAGGCCGGTCTGGAAGGTTTCAGCCGGGCGATGGCGCGTGAAGTCGGTTCGCGTTCGATTACGGTC AACTCGGTAACCCCTGGGTTCATCGACACCGATATGACCCGCGAGCTGCCTGAAGCACAGCGTGAAGCCTTGCAGACGCAGATTCCGCTGGGTCGTCTGG GGCAAGCTCAAGAGATCGCGTCCGTGGTCGCTTTTCTTGCATCCGACGGTGCGGCATACGTTACCGGGGCTACAATCCCGGTGAACGGTGGGATGTACAT GTAAGTAAAATGTGACGGATTGCTTCAAAAAAATGTCATACGAGCTGTCTAAAATCCGTTATAAAGCTGCAATCTATTTATAGGCAGAGGGTCGCAGGGT TTGAGGAGTGAAGCTTTCAGTTGAAAAACTGAAAAGGCTTTCTATACACTTACCCACTGGCCAGCTGCCTGAATTTGTCCATTAGGAGTGAAAACAAGGT
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DNA Sequence for Gene |
>PMO01_19770
|acpP
ATGAGCACCATCGAAGAGCGCGTCAAGAAAATCGTTGCCGAGCAACTGGGTGTTAAGGAAGAAGAAGTGGTCAACACCGCTTCCTTCGTAGAAGACCTGG GTGCCGACTCCCTTGACACCGTTGAGCTGGTGATGGCTCTGGAAGAGGAATTCGAGACCGAAATCCCTGACGAAGAAGCTGAAAAGATCACTACTGTACA AGCTGCAATCGACTACGTTACCAGCCACCAGGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGTTTGTAATCGTTGCTTGCTGTCATGGAAAAACCGCACTGCCATCATGGCGTGCGGTTTTTTCTTTAGGCCTGATGCAAAGTCGTCATTTGAAAAAGG AGAGTGCTGTGTCGCGTAGACGCGTCGTAGTCACCGGTATGGGTATGTTGTCGCCACTGGGCACGGATGTGCCGAGCAGTTGGCAGGGCATTCTGGCTGG CCGCAGTGGCATTGGTCTGATCGAACACACCGACCTTTCTGCCTATTCGACCCGCTTCGGTGGTTCGGTCAAAGGCTTCAATGTCGAGGAATACCTGTCG GTCAAGGAAGCGCGCAAGCTCGACCTGTTCATTCAGTACGGCCTCGCCGCAGGCTTTCAAGCCGTGCGCAACGCCGGTCTGGAAGTCACCGATGCCAACC GTGAACGCATTGGCGTGGCCATGGGTTCGGGGATTGGCGGTCTGACCAACATCGAAGAGACCAGCCGCACCCTGCACGAGACCGGTCCACGACGGATCTC
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Amino Acid Sequence |
>acyl carrier protein
MSTIEERVKKIVAEQLGVKEEEVVNTASFVEDLGADSLDTVELVMALEEEFETEIPDEEAEKITTVQAAIDYVTSHQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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