Pseudomonas moraviensis R28-S, PMO01_19385
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCACCGAGAAAGGCATCGTCGAACGCCCGGACACCGCGAAAATGGCCCAGCTGATGTGCCGCAAGCGCCTGCATTGAAGGGCTGTAGCGTCTGAGCGGGC CCCATCGCTGGCAAGCCAGCTCCCACAGGTTTTGTGCCCGGCATTGAACCTGTGGGAGCTGGCTTGCCAGCGATGAGGGCCTGAATGTCAATAAACAACT GTAAATCTGCCCCGGATTTCACATTCAAAGAAGCTCAGAGCTTCTGTCGTCCCCCTCAAGCCTGTCATCGGTCAACTAACTATGCTCCATGCGCATCTGG GGGATAGGTGCGTGGCGGCCTTTGTGATAACATCCGGCGTTTTCCGAGGCGGCTCCACGGAGCTGTCTTTACTGCGCAAATCCGCGATCCAATGTTGATT TGTCGTAAGTCGGCGCATGGCACTCGGCCGGCCCCGACGAGCTTCGTTGCTCCCACATGGATATGACGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTC
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| DNA Sequence for Gene |
>PMO01_19385
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCAATGAGCGTGATCGTCGGCCGTGCAC TGCCGGATGCGCGCGATGGCCTCAAGCCCGTGCACCGTCGCGTACTGTTCGCGATGAGCGAGCTGGGCAACGACTACAACAAGCCGTACAAGAAATCTGC CCGTGTCGTCGGCGACGTGATCGGTAAGTATCACCCGCACGGTGACACTGCCGTGTACGACACCATCGTTCGTATGGCCCAGCCTTTCTCCCTGCGCTAC CTGCTGGTCGACGGCCAGGGCAACTTCGGTTCGGTCGACGGCGACAACGCTGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCACGAGC TGCTGGCTGACCTGCACAAGGAAACCGTGGACTGGGTGCCGAACTACGACGGCACCGAACTGATCCCGGCAGTCATGCCGACCCGCGTACCGAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTAGGCATGGCGACCAACATTCCGCCGCACAACCTCGGTGAAGTCATCGACGGTTGCCTGGCCCTCATCGACAAC CCCGAGCTGACCGTCGATGAGCTGATGCAATACATTCCCGGTCCGGACTTCCCGACGGCTGCGATCATCAACGGTCGCGCCGGCATCATCGAAGCCTACC GCACCGGTCGCGGGCGCATTTACATGCGTGCCCGCTCGATCATCGAAGACATCGACAAGGTGGGTGGCCGTCAGCAGATCGTCATCACCGAACTGCCTTA CCAGCTGAACAAGGCGCGTCTGATCGAGAAGATCGCCGAGCTGGTCAAAGAGAAGAAACTCGAAGGCATCACCGAGCTGCGCGACGAGTCCGACAAGGAC GGTATGCGTGTCGTGATCGAGCTGCGTCGCGGCGAAGTGCCTGAGGTGATCCTCAACAACCTCTACGCCCAGACCCAGCTGCAATCGGTGTTCGGTATCA ACATCGTCGCGCTGATCGACGGCCGCCCGCGCATCCTCAACCTCAAGGATCTGCTGGAAGCCTTCGTCCGTCACCGTCGCGAAGTGGTTACCCGTCGTAC CGTGTTCGAACTGCGCAAGGCGCGCGAGCGCGGGCACATTCTCGAAGGTCAGGCCGTTGCCCTGTCGAACATCGATCCGGTCATCGCCCTGATCAAAGCT TCGCCAACGCCGTCGGAAGCCAAGGAAGCGCTGATCAGCACGCCTTGGGAATCTTCCGCCGTGGTGGCGATGGTTGAACGCGCTGGTGCCGATTCGTGCC GTCCGGAAAACCTCGATCCGCAATATGGCCTGCGCGAAGGCAAGTACTTCCTCTCGCCAGAACAGGCGCAAGCCATTCTCGAACTGCGCCTGCACCGTCT GACCGGTCTGGAGCACGAGAAGCTGCTGGCCGAGTATCAAGAGATCCTCAACCAGATCGGCGAGCTGATCCGCATCCTCAACAGCGCTGTGCGCCTGATG GAAGTGATCCGCGAAGAGCTGGAAGTGATCCGCGCCGAATACGGCGACGTGCGCCGCACCGAAATCCTCGATGCCCGTCTCGACCTGACCCTGGGTGACA TGATCCCGGAAGAAGAGCGCGTCGTGACCATCTCTCACGGTGGCTACGCCAAGACCCAGCCGCTGGCTGCGTACCAGGCTCAGCGTCGTGGCGGCAAAGG CAAATCGGCTACCGGCGTCAAGGACGAGGACTACATCGCTCACCTGCTGGTTGCCAACAGCCACACCACGCTGCTGCTGTTCTCCAGCAAGGGCAAGGTG TACTGGCTCAAGACCTACGAGATTCCGGAAGCATCCCGCGCGGCCCGTGGTCGTCCGCTGGTCAATCTGCTGCCGCTGGATGACGGTGAATACATCACCA CCATGCTGCCGGTCGAGGAATACACCGAAGGTCACTACATCTTCATGGCCACCGCCAACGGCACCGTGAAGAAGACCCCGCTGGAATCCTTCAGCCGTCA GCGCAGCGTCGGTCTGATCGCGCTGGAGCTGGACGAAGGCGACGTGCTGATCTCCGCGGCCATCACCGATGGCGAGCGCGAAGTGATGCTGTTCTCCGAC GGCGGCAAGGTCACCCGCTTCAAAGAGTCCGACGTGCGTGCCATGGGCCGTACCGCTCGCGGCGTGCGCGGCATGCGTCTGCCGGAAGGGCAGAAGCTGA TTTCCATGCTGATCCCGGAAGAAGGCAGCCAGATCCTCACCGCTTCCGAGCGTGGTTATGGCAAGCGCACCGCGATCACCGAGTTCCCTGAGTACAAGCG TGGCGGCCAAGGCGTGATCGCCATGGTCAGCAACGAGCGTAACGGCCGTCTGGTCGGCGCAGTGCAGGTGCTCGACGGCGAAGAAATCATGCTGATCTCC GATCAGGGCACTCTGGTGCGTACCCGTGTCGACGAAGTGTCGAGCCTGGGTCGTAACACTCAGGGCGTGACGCTGATCAAGCTGGCCAAGGATGAAACCC TGGTCGGGCTGGAGCGGGTTCAGGAGCCTTCGGAAATCGAAGGCGAAGAGCTCGAAGGTGAAGAGGGCGAGGAAATCGCAGGCAGCGTCGGTATCGACGA AGCAGGTGAAGACCAGCAACTCGACGCCGCAGCAGACGAAGAACCGCAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGACAAACGAGGGGGCGGATGAGAATTCGCCCCCTTGTTATTTGTCCGGTATGAAAATTTGCAACACTGCGGATGATCGTTCCCACGCTCTGCGTGGG AATGCCGCTGGGGACGCTCCGCGTCCCATGACGCAGAGCGTCATTGGATGCATTCCCACGCGGAGCGTGGGAACGATCAGCCGCAAACCAAAAGATTCAA GTGACCACCAAATCAGAGCGAGATTGGATGTGAGCAAGCGAGCCTATAACTTCTGCGCCGGTCCGGCGGCGCTGCCTGAAGCTGTCCTGCAGCGCGCCCA GGGTGAACTCCTTGATTGGCACGGCAAGGGTCTGTCGGTCATGGAAATGAGCCATCGCAGCGATGAGTTCGTGTCCATCGCGACCCAGGCCGAGCAGGAT CTGCGTGACCTGCTGAATATCCCGTCGAACTACAAAGTTCTGTTTTTGCAGGGCGGCGCCAGCCAGCAGTTCGCGCAGATCCCGCTGAACCTGTTGCCTG
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| Amino Acid Sequence |
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDYNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALISTPWESSAVVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILNSAVRLM EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSD GGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLIS DQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERVQEPSEIEGEELEGEEGEEIAGSVGIDEAGEDQQLDAAADEEPQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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