Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCTTCGTTTTGGATATGGGTGAGCCGGTAAAAATCGTCGAACTTGCGGAGAAAATGATTCACCTGTCCGGACTGAGCATCCGATCGGAGCGCAATCCTC AAGGCGACATCTCCATCGAGTTCACCGGTTTGCGCCCGGGCGAAAAACTCTACGAGGAATTGCTCATCGGGGATAACGTCGCAGCGACATCGCATCCGAT GATCATGTGCGCCAATGAGGATCACCTTCCTTGGGACGTTCTGAAAACCCGATTGAACGAACTGCTCAAAGCCGTCGAGGCCGACGACTACACCCGCGTC CGCCAGCTCCTGCGCGAAACCGTCTCCGGCTACACCCCCGATGGCGAAATCGTCGACTGGATCTACCAGCAACGTCGTCTCGAGCCCTGATTGTTTCACA TCCTGTAACGCTCGCATTTTTGACTTAGCTCCATCATGACCTACGTTTAGAGAGCAGCTTGGGAAAAGCTGCTTTCTAAAACGATGATGGAGCGTCACTT
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DNA Sequence for Gene |
>PMO01_19255
ATGCGTACCGGTTATTTCTACTCGCTGATTTTTGCTTTCCTCACCAGCGCCTCGATCGCTGCGATTGCTGCGCCTGTAGCGCCCGCCGAGACAATAAAGG CGCCTTTGCTGATGGATGCGGCTGCGCCCTCGGCAAGCGCGAAGGTCGATCTCAACGGCGCGGATGCGGCAACGTTGCAGAAGGAGTTGGCGGGTGTGGG TGAGGCCAAGGCACAGGCGATTGTTGCGTATCGTGATACAAACGGGCCGTTCGCGTCGGTGGATGAATTGCTGGAAGTGAAGGGGATTGGCAAGGCGATT CTGGATCGCAATCGTGAAAAGCTGGAAGTGAACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGACAGTTCAACGCCGAGAGGCCGGTCACTGACCGGCCTTTTTATTGGGTGCTGATCGGGTAGATGCCTAGACGCTGAAAATTACGGATATCATATTG CGCTTTGATTATGCCTATAATAATTTCGCTCGGGACTGATTCAGCTGCCGAATCGCAGCACACCGATGCACGTCGAATTTTGAATTGATAAGGGGTAACC ACGGTATGAACCAACGTCGAGTCGTCGTCACGGGCATGGGCCTGGTTTCACCCTTGGGCAGTGATGTTGAAATTGTCTGGCAGCGTTCGCTGGCCGGTCG TTCCGGGTTGCGCAATTTGCCCGATGCGGTTGTGGCTGATCTGCCGACGCGGGTCGGCGGGAGTGTGCCGACGGTGGAGGAGGACGCGGAGGCCGGGTTT GATCCGGATCGTGCGACGCCGCCCAAGGAACAGAAGAAGATGGATCGCTTCATCATGTTCGCCATGGAAGCGGCTCGGCAGGCGCTGGAGCAGGCCGGTT
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Amino Acid Sequence |
>competence protein ComEA
MRTGYFYSLIFAFLTSASIAAIAAPVAPAETIKAPLLMDAAAPSASAKVDLNGADAATLQKELAGVGEAKAQAIVAYRDTNGPFASVDELLEVKGIGKAI LDRNREKLEVN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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