Pseudomonas moraviensis R28-S, PMO01_16735 (clpP)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCCAAAGGCTCTGCTGTCCAACGAAGTTGACCGTCTGCGCGTGCAGGCTGTTCAGCAGTTCGGCGGCAACATCAAGCCAGACCAACTGCCGGCCGAGC TGTTCGAAGAACAAGCCAAGCGCCGCGTCGTGCTGGGCCTGATCGTTGCTGAAGTGGTCAAGCAGTTCGACCTCAAGCCTGACGAAGCTCGCGTTCGCGA AATGATTCAGGAAATGGCTTCCGCTTACCAGGAGCCAGAGCAGGTCGTGTCGTGGTACTACAAAAACGAGCAGCAACTGAACGAAGTGCGTTCGGTTGTG CTGGAAGAACAAGTTGTGGATACTGTTCTGCAGAAAGCTAGTGTGACCGACAAATCGGTCTCCTACGAAGAAGCAGTCAAGCCGGTAGAAGCTCCAGCAG CCGACTGATTGATTTTGCGTTAGAAGTGCACACCATAAGCCAGCTCTCGAGCTGGCTTATGCGTATTCAAGACATAACTATTTGGGAGCGACTGCAGAGC
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| DNA Sequence for Gene |
>PMO01_16735
|clpP
ATGTTCCGTAATTCTTATATTCAGCAGAACTCTGATATCCAGGCCGCCGGCGGCCTGGTCCCGATGGTTGTCGAGCAGTCCGCTCGTGGCGAACGCGCCT ACGACATCTACTCGCGCCTGCTCAAGGAGCGAGTGATCTTTCTGGTGGGCCCGGTAGAGGACTACATGGCCAACCTGATCTGTGCGCAACTGCTGTTCCT TGAAGCGGAAAACCCGGACAAGGACATCCATCTGTACATCAACTCGCCGGGCGGTTCGGTGACTGCCGGCATGTCGATCTACGACACCATGCAGTTCATC AAGCCGAACGTATCGACCACCTGCATCGGTCAGGCCTGCAGCATGGGCGCATTCCTGCTCACCGCAGGTGCACCGGGCAAGCGTTTCTGCCTGCCGAACT CGCGCGTGATGATTCACCAGCCACTGGGCGGTTTCCAGGGTCAGGCGTCGGACATCGAAATCCACGCCAAGGAAATCCTCTTCATCCGCGAGCGTCTGAA CATGCTGATGGCCAAGCACAGCGGCCGTACTCTGGAAGAAATCGAGCGCGATACCAATCGCGACAACTTCATGAGTGCCGAAGCTGCGAAGGAATACGGC CTGATCGACGAAGTGATCAACCAGCGTCCAGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATAAGCAGCGCAAAACAGGCCTGATCGGCATGTCCGATCAGCGGCGGGCTTGAAAAAGCCCGCAATAGCCTTCATCTTGTGTTGCAAGCCTATCGGATT TGGATCGAACGAATGACTGACACCCGCAACGGCGAGGACAACGGCAAGCTGCTCTATTGCTCCTTCTGTGGCAAAAGCCAGCATGAAGTGCGCAAATTGA TTGCCGGCCCCTCGGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAATGACATCATCCGCGAGGAGGTGCAGGAAGCACAGGCCGAAAGCAGCGCGCA TAAATTGCCTTCGCCTAAAGAAATCAGCGGCATCCTTGACCAGTACGTCATTGGTCAGGAGCGTGCGAAAAAGGTTTTGGCCGTAGCGGTGTACAACCAC TACAAGCGCCTGAACCAGCGTGACAAAAAGGCTGACGACGTCGAACTCGGCAAGAGCAACATCCTGCTGATCGGCCCGACAGGCTCCGGTAAAACCCTGC
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| Amino Acid Sequence |
>ATP-dependent Clp protease proteolytic subunit
MFRNSYIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFI KPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNMLMAKHSGRTLEEIERDTNRDNFMSAEAAKEYG LIDEVINQRPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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