Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCTCCAGTCTGGCCAACGGCGGCGCATCCTGGTTGCGGTCGAATACTTGAATTCCAACCTTGAGCAGTCGCCCATTCTCTGCGCTGGCGATCACCTGTTC ACAGCGCAACATAAGCCGTCCTTGATCACATTCAACAGCCTTCACCCCATTCGGCAATCGACCTTCCAGCCGTAGCTCAGCCATCCGGCTCTGCGCGGCA ATCATCGCCACCGACCGATCCCTTAAAACCCCACTGCTCTGCGTCATCAACCCCGCGACGCGCACGGCGGCGGACATGGCGACGGCGATGATCGCCAGTG CCACCAGCACTTCAATCAGGGTGAATCCTTTCTCTCGCGAACGCGCGCGCATACATGGCCCAAAACTAAAACCCAGCCCTCGACGCTAACCCGCGTCCTT GACGGCTTGACGACGGAAACACCCGAGGATTTTCAACATCCCTGACATATCTTCTTGCAACACTGCGCGTCGAATTCGGATCAAGCCAGGGAATGTCGAG
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DNA Sequence for Gene |
>PMO01_14585
ATGGATATCGCACCTTTGAACACGCTCAGTCAGTCGCCGCGCATGCCGCGTAGCCAGCAGGGTTTTACCTTGATCGAGATCATGGTGGTGGTGGTGATTC TGGGGATTCTGGCGGCGATGGTGGTGCCCAAGGTGCTCGACCGGCCGGATCAGGCGCGGGCGACGGCGGCGAAGCAGGATATTGGTGGGTTGATGCAGGC GTTGAAGTTGTATCGCCTCGATCACGGCACGTATCCGAGCATGAACCAGGGGCTGAAGGTGTTGGTCGAGCGGCCGGCGGATGCGAAGAACAGCAACTGG CGGTCGTACCTGGAGCGTTTGCCGAATGACCCGTGGGGCCGGCCTTATCAGTACCTCAACCCGGGCGCGAATGGTGAGGTCGATATCTTTTCCCTCGGCG CCGATGGCCAGCCTGACGGCGATGGCGTGAATGCCGATATCGGTTCCTGGCAGTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCGGCCGTGAACACAGGTTCGCTCAACGGGGCGAAGCAACGGGGCATGGCGATTATCAGCGCGTTGTTGATTGCCACCGTGGTGGCGGTGATTGCGGC GGGGATGTTGACGCGTCAGAGCGTGGCGACCCGGGCGCTGGAGGCCGATCAGCAGCGGGTGCAGGGGCGTTGGCTGGCGCAGGGTGGTCTGGAGATCAGC CGGCAGTTGCTGTGGGATGCGCGCCTGCGTGATCCGTTGACCCGGCGTGATCAGCCTTGGGCGCAGCCGTTGTTGGCGGCGGGTTTTGCCGGGCGGCTGG AGGACGAGCAGGGCAAGTTCAACCTGCGCAATCTGGTCGCCAATGAGCGCATCGATGAGGCGCAGGTGCAGGCGTTCGAGCGTTTGTGCGAGCTGATCGG CGTGAGTGGCGTTGTCGGCCAGCGCATCCGTCAGCGGGTGATTGCCGGTTATCCGCATCTGCTGAATGCGCAGATTGGCGCGACAGGCAAAGCAGGTTTC
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Amino Acid Sequence |
>general secretion pathway protein GspG
MDIAPLNTLSQSPRMPRSQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGTYPSMNQGLKVLVERPADAKNSNW RSYLERLPNDPWGRPYQYLNPGANGEVDIFSLGADGQPDGDGVNADIGSWQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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