Pseudomonas moraviensis R28-S, PMO01_13895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTCAGAACAGCTGACCTCCGCCGGTTTCGACCTGCAACACAGCGAGATCCTCGCCACCGCCGATGGCGTGGCAGTCAACCTCGGTGTGCACACCGAAG GCGCCGTGGTGCGCCAAGGCGAAACCCTGCTGGAGATCGTTCCGCAAGGCACCACCCTGGAAGTGGAAGGGCACTTGCCGATCAACCTGATCGACAAGGT CGGCACGCATTTGCCGGTGGACATTCTGTTTACCGCGTTCAACCAGAGCAAAACCCCGCGCGTGCCCGGCGAAGTCAGCCTGATCTCCGCTGACCAGATG GTCGATGAGAAAACTGGCGTGCCGTATTACGTGTTGCGCAGCAGCGTCAGTGATCAGGCGATGGAAAAGCTCAACGGTCTGGTGATCAAGCCCGGCATGC CGGCGGAAATGTTCGTGCGCACCGGTGAGCGTTCACTCCTCAACTACCTGTTCAAACCGCTGCTTGATCGCGCCGGTTCTGCGTTGACCGAGGAATAAGG
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| DNA Sequence for Gene |
>PMO01_13895
ATGTTCGGCTGTATGAAAAAGCTTTGCATGCTGGGGGCCGCAATGACGCTGCTCGCGAGTCACTCGGCAGTCGCGGCCATGGGGCCATTCGAGATTTACG AACAGGCGTTGCGCAACGATCCGGTGTTCCTCGGTGCAATCAAGGAGCGCGATGCCGGCCTGGAAAACCGCGTAATTGGCCGCGCCGGGCTGCTGCCACG GATCGGTTACACCTACAACAAGGGCCGCAACTCTTCCAAGGCGACGTCTCTGGATGATCGTGCGCGCAATCGAACTGATGAGCGCAACTACAACAGTTAC GGCTCGGCGCTCACGGTGCAGCAACCGCTGCTCGACTACGAGGCTTACGCGGCGTATCGCAAAGGCGTGGCGCAGTCGTTGTTTGCCGACGAAGCGTTTC GCGGCAAGAGTCAGGAACTGTTGGTGCGCGTGCTGGATAACTACACCAAAGCCTTGTTCGCCCAGGACCAGATCGACATCGCCCAGGCGAAGAAGAAGGC CTACGAACAGCAGTTCCAGCAGAACGAACACATGTTCAAGCAGGGCGAGGGCACGCGCACCGATATTCTCGAAGCCGAGTCGCGCTATGAGCTGGCGACT GCCGAGGAGATCGAAGCGCGCAACGAGCAGGATGCCGCCTTGCGTGAGCTGGGCGCGCTGGTGGGCGTGCCGGCGGTGGACATCGGCGATCTGGCGCCGC TTGGTCAGCAATTTCAGACCTTCACCCTGCAACCGGCCAACTTCGACACCTGGCATGAACTGGCGATCAGCAACAACCCGAACCTCGCTTCGCAGCGTCA GGCCGTGGAAGTGGCGCGCTACGAAGTCGAGCGCAACCGCGCCGGGCATCTGCCGAAAGTCAGTGCTTATGCCTCGATGCGCGACAACGAGTCGGAAAGC GGCAACACCTATAACCAGCGCTACGAAACCAACACCATCGGCCTGGAAGTCAGCGTGCCGCTGTACGCCGGCGGCGGGGTATCGGCGTCGACGCGTCAGG CCAGCCGCACCATGGAACAGGCCGAATACGAGCTGGATGGCAAAACCCGCGAAACCTTGATCGAACTGCGCCGCCAGTTCAGCGCCTGCCTGTCCGGGGT GAGCAAATTGCGCGCTTATCAGAAGGCCCTGAAGTCGGCCGAGGCGCTGGTGGTCTCGACCCGACAAAGCATTCTGGGCGGCGAACGCACCAATCTCGAC GCGTTGAACGCCGAGCAGCAACTGTTCACCACCCGCCGCGACCTGGCCCAGGCACGCTACGACTATCTGATGGCCTGGACCAAATTGCATTACTACGCCG GGACGCTGAATGAGCAGGATCTGGCGCGGGTGGACGAAGCATTTGTGGTCGCGCAACAGCCCTCACCCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTCTCCCAGGGGGAGAGGGGACCGATCTGGGGAGATTGGCGAGATGCACCGACTTGTACGAGCTGTGCTGAATCCGTAATCGACTGGTTTTCTCAGGT CGCTGAATGACTGAAGACAACACGGTCGGCTCCCTCTCCCTTTGGGAGAGGGCTGGGGTGAGGGAAACGGGCGACACCGCAGGATCTGAGGCTTTGCACC GAGACGTTAATGAGCAGGATCTGGCGCGGGTGGACGAAGCATTTGTGGTCGCGCAACAGCCCTCACCCTAACCCTCTCCCAGGGGGAGAGGGGACTGACC GAGTGGCCTGCGATAGCTGCATCGACCTGAACGACCGAGCTGGACGCAGGTTTGACATCAACAAAAATCGGCTCCCTCTCCTCGGGGAGAGGGCTGGGGT GAGGGGAACAGGCGACACCGCAATTCAGCCCTGAACAAAACAACAAAAACGAGAGTGATGACCATGGACGTACGCATAAAGCCGATTTCGCTCGGCACGC
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| Amino Acid Sequence |
>peptidase
MFGCMKKLCMLGAAMTLLASHSAVAAMGPFEIYEQALRNDPVFLGAIKERDAGLENRVIGRAGLLPRIGYTYNKGRNSSKATSLDDRARNRTDERNYNSY GSALTVQQPLLDYEAYAAYRKGVAQSLFADEAFRGKSQELLVRVLDNYTKALFAQDQIDIAQAKKKAYEQQFQQNEHMFKQGEGTRTDILEAESRYELAT AEEIEARNEQDAALRELGALVGVPAVDIGDLAPLGQQFQTFTLQPANFDTWHELAISNNPNLASQRQAVEVARYEVERNRAGHLPKVSAYASMRDNESES GNTYNQRYETNTIGLEVSVPLYAGGGVSASTRQASRTMEQAEYELDGKTRETLIELRRQFSACLSGVSKLRAYQKALKSAEALVVSTRQSILGGERTNLD ALNAEQQLFTTRRDLAQARYDYLMAWTKLHYYAGTLNEQDLARVDEAFVVAQQPSP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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