Pseudomonas moraviensis R28-S, PMO01_10230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGGGCAACGTTTTCTGGAGATCTGGTCGGGGCTGCCGGTGCTGTATCTGTTGATCATCCTCGCCAGTTTCGTCCAGCCGAATTTCTGGTGGCTGCTG GGCATCATGCTGCTGTTCTCGTGGATGAGCCTGGTCGATGTGGTGCGCGCCGAGTTCCTGCGCGGGCGCAATCTGGAATACGTGCGCGCCGCCCGCGCGC TGGGCATGCAGAACGGCGCGATCATGTTCCGCCATATCCTGCCCAACGCCATGGTCTCGACCATGACCTTCATGCCGTTCATCCTCACCGGCGCCATCGG CACCCTGACCGCGCTGGACTTCCTCGGCTTCGGCTTGCCGGCCGGCAGTCCGTCGCTGGGCGAACTGGTCGCGCAAGGCAAATCCAATTTGCAGGCGCCG TGGCTGGGCATGAGTGCGTTTGCCGTGCTGGCGCTGATGTTGAGTCTGCTGGTGTTTATCGGCGAGTCCGCTCGCGATGCCTTCGACCCGAGGAAGTGAA
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| DNA Sequence for Gene |
>PMO01_10230
ATGAATCAGGACAATCTGATCGAAGTGCGCGACCTCGCCGTCGAATTCGGTTTCGGCGAGCGCGTCCACCGCGTGGTCGAGGGCGTGAGCTTCGACATCA AGCGCGGTGAGACCCTGGCGCTGGTCGGTGAATCGGGCTCGGGCAAATCGGTCACGGCGCATTCAATCCTGCGCCTGCTGCCCTACCCCATGGCGCGGCA TCCGGCCGGCAGCATCAATTACGCCGAGCAGAACCTGCTGGATTTGAGCGAGAAGACCATCCGCCATATTCGTGGCAACCGCATCGCGATGATCTTTCAG GAGCCGATGACTTCGCTCAATCCGCTGCACTCGATCGAAAAGCAGATCAACGAAGTGCTCGGCATCCACAAGGGCCTGAGCGGCAAAGTCGCGACCAAGC GCACTTTGGAGCTGCTGGAGATGGTCGGCATCCCCGAGCCGCACAAGCGTCTCAAGGCCCTGCCCCATGAATTGTCCGGCGGCCAGCGCCAGCGGGTGAT GATTGCCATGGCCCTGGCCAACGAGCCGGAATTGCTGATTGCCGACGAACCGACCACCGCGCTGGACGTGACCGTTCAGCTGAAAATCCTCGATTTGCTC AAGGATCTTCAGGCTCGATTGGGCATGTCGCTGTTACTGATCAGTCACGATTTGAACCTGGTGCGAAGAATTGCGCATCGCGTATGTGTCATGCAGCGCG GTTGCATCGTCGAACAGGCATCGTGCGCAGAGCTGTTCCGTTCGCCGCAGCATCCGTACACTCGGGAATTGCTCGGCGCGGAGCCCAGCGGCGGCCCCGC GAGCAATGAAATCGGCGCGCCGCTGCTCGAAGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAGAAAGGCCTGCTCAAGCGCACGGTGGATTACGTCAAG GCAGTAGACGGCATCAATTTCAGCCTGCCGCAGGGGCAGACCCTTGGGATCGTCGGCGAAAGCGGTTCCGGCAAATCCACCCTTGGTCTGGCGATTTTGC GGCTGATCGGCAGCAAAGGCGCGATCCGCTTTGAAGGCAAGCAGCTAGACTGCCTGACGCAGAGTGAGGTTCGCCCGCTGCGGCGGGAGATGCAGGTGGT GTTTCAGGACCCATTTGGCAGCCTGAGCCCGCGCATGTGCGTCAATGACATCGTTGGCGAAGGCCTGCGGATACACAAGATGGGCACCGCGACCGAACAG GAAGCGGCGATCATTGCGGCATTGAAGGAGGTAGGTCTGGATCCGGAAACCCGGCACCGCTACCCCCACGAATTTTCCGGAGGGCAACGGCAGCGAATCG CCATTGCCCGGGCCTTGGTGCTGAAACCGGCGCTGATCCTGCTGGACGAGCCGACTTCGGCCCTCGACCGCACGGTGCAGCGGCAAGTGGTGGAGCTGTT GCGTTCACTGCAAGCCAAGTACAACCTGACGTATTTGTTCATCAGCCATGACCTGGCTGTCGTCAAAGCGCTGAGCCACCAGCTGATGGTGGTCAAGCAT GGCCAAGTGGTCGAACAGGGAGACGCGCAAAGTATCTTTGCCGCCCCCCAACATCCGTATACACAGCAGTTGCTGGAAGCCGCTTTTCTGGCACCAGCCA CTGCGCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGAAAGAGGAGCAACACATGGGTTTTCTCGCCGGTAAGCGCGTACTGATCGTCGGTGTCGCCAGCAAGCTGTCCATCGCATCCGGCATCGCTGCCGCC ATGCATCGCGAGGGCGCTGAGCTTGCCTTCACTTATCAGAACGACAAACTCAAGGGTCGCGTCGAAGAATTCGCACAAGGCTGGGGTTCGAGCCCTGAGC TGTGCTTCCCGTGCGACGTGGCCAGCGATGAAGAAATCGCCAAGGTCTTCGAACAACTGAGCAAGAAGTGGGACGGCCTGGACTGCATCGTGCACTCCGT CGGCTTCGCCCCGGGCGACCAACTGGACGGCGACTTCACCGAAGCCACCACCCGTGAAGGTTTCCGCATCGCTCACGACATCAGCGCCTACAGCTTCGTG GCCCTGGCCAAAGCCGGTCGCGAAATGATGAAAGGCCGCAACGGCAGCCTGCTGACCCTGTCGTACCTGGGCGCCGAGCGCACCATGCCGAACTACAACG
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| Amino Acid Sequence |
>microcin C ABC transporter ATP-binding protein YejF
MNQDNLIEVRDLAVEFGFGERVHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPMARHPAGSINYAEQNLLDLSEKTIRHIRGNRIAMIFQ EPMTSLNPLHSIEKQINEVLGIHKGLSGKVATKRTLELLEMVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLL KDLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQASCAELFRSPQHPYTRELLGAEPSGGPASNEIGAPLLEVEDLKVWFPIKKGLLKRTVDYVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSKGAIRFEGKQLDCLTQSEVRPLRREMQVVFQDPFGSLSPRMCVNDIVGEGLRIHKMGTATEQ EAAIIAALKEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKH GQVVEQGDAQSIFAAPQHPYTQQLLEAAFLAPATAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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