Pseudomonas moraviensis R28-S, PMO01_09245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACTACCTGTTCGATGACTTGATCCAGGGCGATCGTGAAGTGCCGCAGGATGCCACCCGCTACCTCGAACGTCTGGAGATCGCGCACAAGGTCAGCGTG CGCGACGGCGCGTTCAGCACCACCGACCTGTCCACAGGCCAGCGCAAACGCCTGGCACTGGTCAACGCCTGGCTCGAAGAGCGCCCAGTGCTGGTGTTCG ATGAATGGGCGGCGGATCAGGACCCGACCTTCCGGCGGATCTTCTATACCGAGCTGCTGCCCGACCTCAAGCGTCTGGGCAAAACCATCATCGTGATTTC CCACGACGACCGTTATTTCGACGTCGCCGATCAACTGGTGCGCATGGAGGCCGGCAAGGTCAGAAGCGAACTGCAAACCGCTTGATCGAGGCAGCCGCGA CCGGGCCGGAGAAAAAACTTTTCCGGTTTGCCGCGGCTTCCTCGTCTTAATGAGATGAATAAGAACCATTAACAACTATACCTGCCAAGGTCTTAACCTC
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| DNA Sequence for Gene |
>PMO01_09245
ATGTCCGCATCCCGTTTCATGCTTCGCCCTCTGACTCGAGCCCTGCTGATGCACGGCGCGACCCGCACACGCCTGGCCGGTAGCGGCCTGGGTCTGGCAC TGACCCTCGCGGCAGCGCCGTATGTCCAGGCCCAGGAATGGACCCTGAACATCCCGGCCCAACCGCTGGCCCAGGCCCTGCAAACCCTCGGTCAGCAGAC CAGCCTGCAAATCATCTACAGCCCGGAAAGCCTGCAAGGCCTGCGCTCCAGCGCCCTCAACGGCCGCTATCAGGATGACGAGTCGCTCAAGGCCATGCTC AGCGGCACCGGCATCCGCTATCAGCGTGACGGCAACACCGTCACCGTGCTCGGCCCGGCCACTGGTGGCAGCGCGATGGAGCTGGCGCCGACCAACGTCA ACGCCAACCGCCTCGGCGCCACCACCGAAGGCAGCAACTCCTACACCACCGGCGGCGTGACCATCGGCAAAGGCGTGCACTCGCTGAAGGAAACGCCGCA GTCGGTCACGGTGATGACCCGCAAGATGCTCGACGACCAGAACCTCAACACCATCGAACAGGTGATGGAGAAGACCCCGGGCATCACCGTCTACGACTCG CCAATGGGCGGCAAATATTTCTACTCGCGCGGTTTCCGCATGACCGGCCAGTACCAGTACGACGGCGTGCCGCTGGACATCGGCAGCAGCTACGTGCAGG CGGACAGCTTCAACAGTGACATGGCCATCTACGACCGCGTGGAAATCCTTCGCGGCGCGGCCGGCATGATGAAGGGCGCGGGCGGCACCGCCGGCGGCGT CAACTTCGTGCGCAAGCGCGGCCAGGACACCCCGCACACGCAGCTGTCGCTGTCGGCCGGGACCTGGGACAACTATCGCGGCCAGGTCGACACCGGCGGC CCGCTGAACGACGCCGGCACTGTCCGTGGCCGCGCCGTGGTGACCCAGCAGACCCGTCAGTATTTCTACGATGTGGCTGAACGCCGCGACCAGATCTACT ACGGCGCCCTGGACTTCGACCTCAGCCCCGACACCACCCTCGGTCTGGGCATGGCCTATGAAGACGTCGACGCCACCCCGTGCTGGGGCGGCCTGCCGCG CTACGCCGACGGCTCCGACCTGCACTTGAAACGCTCCACCTGCCTGAACACCTCGTGGAACAACCAGCGCAGCAAACGCGCCACCTACTTCGCCGACGTC AAACACCAGTTCAACGATGACTGGTCGCTGAAAGTCGCCGGTGTCTACTCGCGCAACACCCAGGACATGGAATATTCCTTCCCGAGCGGCACAGTGCCGT TGGGCGCCACAGCCACCAATACGCTGATGCTCGGCAGTACCTATGACTACGATCAGCGCGACTACGGTTTCGATGCTTACGTCGACGGCAAATTCGACGC CTTCGGCCAGCAGCACGAACTGATCGTCGGCGCCAACGCCAGCCGTTCGCACAAGGACGACTTCTATGCGGTGGCGGCATTGCCACAGCGCCAGAACGTG TTCAACCCGAACCACAACATCCCGCAGCCGGATGAAAGCTACTACCTGGCCAACGCCTCCCGTGGCGGCCCGGTGGACATGCACATCAAGCAATACGGCG CTTACTCGATCGCCCGCCTGAAACTCGCCGACCCGATGACCCTGGTACTCGGCAGCCGGGTCAGCTGGTACAAATCCGATACCGATTCGGTGCAGTACTT CCGCGGCGAAGGCACCGAGGTCAACACCCAGTCCACCGAAACCGGCCAGGTCACGCCGTTCGCCGGCCTGCTCTACGACCTCAACGACAACCTGACCGCC TATGCCAGCTACACCGACATCTTCACCCCGCAAGGCTCGTACAAAACCATCGACGGCAGCACGCTCAAGCCGCTGATTGGCCAGAGCTACGAATTGGGGA TCAAGGGTGAATGGTACGACGGTCGCTTGAACACCACGTTCAACCTGTTCCGCACCATCCAGAAAGACGCGGCCCAGGATGACCTGCGGTGCGAAGACAG CTCCTGCCAGATCAACTCGGGCAAGGTCCGCGCCCAGGGCTTTGAAGCTGAAGTCAGCGGTGAAGTGATCGACCGCCTGCAATTGCTGGCCGGTTATACC TACACCCAGACCAAAGTGCTGGAAGACGCCGATGCTACTCAGGATGGCGCGGTCTACAACTCCTACGTGCCGCGTCACCTGTTGCGCGTCTGGGGTGATT ACGCCCTGAGCGGACCGCTGGACCGTGTGACCATTGGTGCGGGTGTCAATGCACAGACGGGCACCTACCGCGTTTCGCCTCTGGGCGGGGACAATGTCGA TGGCGCGGGTTATGCGGTCTGGAACGGTCGCATCGGTTATCGGATCGATGACACCTGGTCGGTGGCGTTGAACGGCAATAACCTGTTCGACAAGCGTTAT TACGCGACCATTGGTACCGAGGGGTTCGGTAACTTCTACGGGGATCCGCGCAATTTTGTGATGTCGGTGAAGGCTGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGGTCTGATGTTGTTTAGAAGCCCCGCTTTGGCGGGGCTTTTTGGTTTTTGGGATTGGGGGCATATCCGTTGCTGCGGGGCTGCCACTGGCGGTTTCGC TCTTACAGCGAGTCACCTTTTCCAAACGCCGGAGTGCCGGCCCGGCGAAAAGGTAACCCAAAAGGCTTTGCCCCGGCGTACGGCCCGCTCGCTAAAGCTC GGAGTACCTTCGTTACGGGACCGATCCGGGCGCAGCCTGCCGAAGGGGCAAAAGATCAAGAGCCAGAGCAAAAGCCCCTCACCCTAGCCCTCTCCCGGAG GGAGAGGGGACTGACCGAGGTGTTCAGGCGAAATACGCCGACTTGCGATATCGAGTCGAATGCAGATTCTGAAAAGCCCGCAAATCGGCTCCCTCTCCCT CGGGAGAGGGCTGGGCGGGCGGCGTTCCGATGAGGGGCGAATCCAACACAGATCCAAAGCAGACCACACGCTTTTCACCACTCAACAATGAGCGTTAGCT
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| Amino Acid Sequence |
>TonB-dependent receptor
MSASRFMLRPLTRALLMHGATRTRLAGSGLGLALTLAAAPYVQAQEWTLNIPAQPLAQALQTLGQQTSLQIIYSPESLQGLRSSALNGRYQDDESLKAML SGTGIRYQRDGNTVTVLGPATGGSAMELAPTNVNANRLGATTEGSNSYTTGGVTIGKGVHSLKETPQSVTVMTRKMLDDQNLNTIEQVMEKTPGITVYDS PMGGKYFYSRGFRMTGQYQYDGVPLDIGSSYVQADSFNSDMAIYDRVEILRGAAGMMKGAGGTAGGVNFVRKRGQDTPHTQLSLSAGTWDNYRGQVDTGG PLNDAGTVRGRAVVTQQTRQYFYDVAERRDQIYYGALDFDLSPDTTLGLGMAYEDVDATPCWGGLPRYADGSDLHLKRSTCLNTSWNNQRSKRATYFADV KHQFNDDWSLKVAGVYSRNTQDMEYSFPSGTVPLGATATNTLMLGSTYDYDQRDYGFDAYVDGKFDAFGQQHELIVGANASRSHKDDFYAVAALPQRQNV FNPNHNIPQPDESYYLANASRGGPVDMHIKQYGAYSIARLKLADPMTLVLGSRVSWYKSDTDSVQYFRGEGTEVNTQSTETGQVTPFAGLLYDLNDNLTA YASYTDIFTPQGSYKTIDGSTLKPLIGQSYELGIKGEWYDGRLNTTFNLFRTIQKDAAQDDLRCEDSSCQINSGKVRAQGFEAEVSGEVIDRLQLLAGYT YTQTKVLEDADATQDGAVYNSYVPRHLLRVWGDYALSGPLDRVTIGAGVNAQTGTYRVSPLGGDNVDGAGYAVWNGRIGYRIDDTWSVALNGNNLFDKRY YATIGTEGFGNFYGDPRNFVMSVKADF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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