Pseudomonas moraviensis R28-S, PMO01_07435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGTTCGTGACCTCCGAGCTTAAAACCGCCTTCCAGATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACCTCGTTGTCGCGAGCGTGCTGATGG CCATGGGTATGATGATGCTCTCGCCGCTGATCATTTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTTGATGGCTGGGCGCTGATCATCGGTACTCT GGCCAGCAGTTTTGGAGGTGTTTCGCCATGACGCCGGAAGTCGCGGTCGATATCTTTCGTGAAGCCCTGTGGCTGACCACCATGATGGTCGCCATCCTGG TGGTGCCGAGCCTGCTGGTCGGCCTGCTGGTGTCGATGTTCCAGGCGGCCACGCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGTCTGCTGGTGAT GCTGGTCACTCTGATCATCGGCGGTCCGTGGATCGTGCAGACGTTCATGGAGTACATCATCCAGCTGTACAAAAACATTCCGATGGTCATCGGCTAAGCC
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| DNA Sequence for Gene |
>PMO01_07435
ATGCAATCGCTGCTTCAGCTGACCGACACCCAGATCAGCACCTGGGTGGCGTCATTCATGTTGCCGCTGTTTCGCGTGGCGTCGATGCTGATGGTCATGC CGGTGTTTGGCACCACGCTGATTCCGCGCCGCGTGCGCCTGTATTTCGCCGTGGCGATCACCGTGGTGATCACCCCGGCGCTGCCGCCGATGCCCGCCGT CAGCCCACTCGATCTCAGCGGCCTGCTGCTGATTGGCGAGCAGATTCTGGTCGGCGCGGTGTTGGGCTTTTCCCTGCAATTGTTCTTTCAGGCATTCGCC GTCGCCGGGCAGATCGTCGCGATCCAGATGGGCATGGGCTTCGCCTCGATGATCGACCCCACCAACGGCGTTTCGGTGGCGGTGATCGGGCAGTTCTTCA CCATGCTGGTGACGTTGCTGTTCCTGTCGATGAACGGCCATCTGGTGGTGTTCGAAGTCCTCACTGAAAGTTTCACCACGCTGCCGGTCGGCGGCGGTCT GATGGTTGCGCATTACTGGGAACTGGCCGGCAAACTCGGCTGGGTCCTCGGCGCCGCGCTGCTGCTGGTGTTGCCGGCCGTCACCGCACTGTTGGTGGTC AACATCGCGTTCGGCGTGATGACCCGCGCCGCGCCGCAACTGAACATCTTCTCGATCGGTTTTCCGCTGACCCTGGTGCTCGGCCTGTTCATCGTCTGGG TGGGGCTCGCGGACATTCTCAACCAGTATCAACCGCTGGCCAGCGAGGCCTTGCAGTTGCTACGCGAACTCGCACGGGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCATGGCAGAGAGCGAAAGCGGTCAGGACAAAACGGAAGACCCCACGGAGAAACGCAAAAAGGACTCCCGTGAGAAGGGTGAAATCGCCCGTTCCAAAG AACTCAACACCCTCGCCGTGATGATGGCTGGCGCCTCTGCGCTGCTGATTTTCGGCGGCATGCTTGCGCAAGAAATGATGGACGTGATGCGCCTGAACTT CACCCTGTCCCGCGAAGTGGTCATGGATCAGGGCGCCATGGGCCGTTTTCTGTTGGAGTCAGGGTTGATCGCCTTGCTGGCGATTCAGCCGGTGATGATC ACCCTGTTGCTCGCCGCCATCATCGGGCCGATCTCCCTCGGTGGCTGGCTGTTCGCCGCAAAGTCGCTGGCGCCCAAATTCAGCCGGATGAACCCGGCCG CCGGCCTCAAACGGATGTTCTCGTTCAAGGCTGTGGTCGAACTGCTCAAAGCCCTGGCGAAGTTTCTGATTACCTTGGGCGTGGCGCTGTTGGTGCTGTC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FliR
MQSLLQLTDTQISTWVASFMLPLFRVASMLMVMPVFGTTLIPRRVRLYFAVAITVVITPALPPMPAVSPLDLSGLLLIGEQILVGAVLGFSLQLFFQAFA VAGQIVAIQMGMGFASMIDPTNGVSVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTTLPVGGGLMVAHYWELAGKLGWVLGAALLLVLPAVTALLVV NIAFGVMTRAAPQLNIFSIGFPLTLVLGLFIVWVGLADILNQYQPLASEALQLLRELARAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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