Pseudomonas moraviensis R28-S, PMO01_05955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGATAGCTGTTGTCCAGCTCCAGCTCAATCTGCACCTCGGGGTATTGCCCGGAAAACTCCAGCAGCAAGCCATCGAAGAAGGTCTCGCCGAGCGACACC GGAACCGTCATGCGCACCGGGCCGGCCATGTCGTCCTTCAAACGCGCCAAAGCCTGCCGCGCGCGTTCGACCTGAACCACCAGCGCCTGAGCCTGCGGCA GCAGCGCCGCCCCCGCCGCCGTCAGGCTCAAGCGCCGGGTCGTGCGTTGCAGCAGCACCACACTGAATTGCGCTTCGAGCTGGCTGATGCGCTTGGAGAG TTGGCCCTTGCTGCAGCCCAACTGCTGCGCGGCCAGGGTAAAACTGCCGGCTTCGATCAGCACTGCAAACGCGGCAAGGTCATCCATTTCGCTCATGGAT TGTTTCCATTTGAAAACCAAAGGTTGCCTATTAGTGCGCTTATCCGCAGAAAAAACCACTCTAGACTGAAACATCATTCACACACATGAGGTACAGCTCG
DNA Sequence for Gene
>PMO01_05955
ATGAAAATTCTGTTGATAGGCGCAGGCGGCACCATCGGTTCGGCGGTGGACAAAGAGTTGTCGCAACGCCACGAGGTCATTCCTATCGGTCGCAACAGCG GTGACTTGCAGGTGGATATCAGCGACAGCGCGTCGATCCGCAAGCTGTTCGAACAGACCGGCAAGTTCGATGCGTTGATCTGCGCGGCGGGCAACGTGAC GTTTGCAGCGCTCGACGAGATGACTGAGGGCAGCTTCGCCCTCGGCCTGAAAGACAAGTTGATGGGCCAGGTCAATCTGCTGCTGATCGGCCGCGAGTTC GCCAATGACGGCGCCTCGTTCACCTTCACCACCGGCGTGCTCAGCCACGACCCGATTCGCAGCGGCGCCTCGGCAGCTCTGGTCAACGGCGCCCTCGACA GCTTCGTCCGCGCCGCCGCCATCGAACTGCCGCGTGGCCTGCGGGTGAACTCGGTGAGCCCGACCGTGCTGACCGAAGCCCTGGGCAAATACGCGCCCTA CTTTCGCGGCTTCAAGCCGGTTCCTGCAGCGGAAGTGGCATTGGCCTACGCGAAAAGTGTCGAAGGCCTGCAAACCGGTCAGACGTTTCACGTCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCCTTGTGATGAACGGTCAGGCTGCGTAACGTGGCAGCACTTGTCTGGAGAGCCAAAGATGCGTGTTGCCCGTTCGATCGTCCTCGTTGCCCTGCTGC CGATGTTTGCCGCCTGCCAGTTGTTCGACGGCCAGCGTGAAAGTGTGTCCCATGCCGGGCAGACGCGGATGCAGGGGCAACTGACCGCCGCCGACGGCAA ACTGGTGTTCCAGCCGTGCCAGGAGCAGCGGCAACTGGTGGTCAACGACATCGGCGGCACCAGCGTCCTGCAAGAAGCCGCCACCCTCGCCGACGAGCAG GGCAAGCTGTTTGCCGATGTGCGCGGCAAGGTTTCCAGCGATCGTCTCGACCTCGGCCAGTTGTATCGCGTCGAGCGCTCGGGCACGGCCTGCGACGATC CGAATTTCAAACTGCTGATCCTGCGCGCCGCCGGCCATGGCCCGGAATGGAACGTCAAGGTCAGCGGCAAAGGCATGGTCATCGAGCGCGACGGCCAGCC
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGAGGTIGSAVDKELSQRHEVIPIGRNSGDLQVDISDSASIRKLFEQTGKFDALICAAGNVTFAALDEMTEGSFALGLKDKLMGQVNLLLIGREF ANDGASFTFTTGVLSHDPIRSGASAALVNGALDSFVRAAAIELPRGLRVNSVSPTVLTEALGKYAPYFRGFKPVPAAEVALAYAKSVEGLQTGQTFHVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site