Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGACGGCTTCCCGCGCACCATTCCGCAGGCTGAAGCGCTGGTCACTGCCGGTGTCGAGCTGGACGCTGTGGTTGAAATCGCTGTTGAAGACGAAGAAA TCGTCCAGCGCATCGCCGGTCGCCGTGTTCACGAAGCCAGCGGCCGCGTTTACCACATCGTCTACAACCCGCCGAAACTGGCTGGCAAGGACGACATCAC CGGCGAAGAGCTGGTGCAGCGCAAGGACGACACCGAAGAAACCGTGCGTCATCGCCTGTCGGTCTACCATTCGCAGACCAAACCGCTGGTGGATTTCTAT AAGAACCTTTCCGCCAACAACGGCGGCAAGCCAAAGTACAGCCACATCGAAGGCGTGGGTTCGGTCGATGCAATCACCGCCAAGGTGTTGGCCGCGCTGA GCTGAAAAGTCTGATCGGCTGCATCATCCACGGCCCGCTTGCGGGCCGTAGTTGTTTATACTGACGCACTTTTTTCCCCACCCCTGTTTTGGAAACATCG
|
|
DNA Sequence for Gene |
>PMO01_04800
ATGAGCACCTTGCTGGCCCTGGACACCGCGACTGAAGCTTGCTCCGTTGCCTTGCTGCATGACGGCAAGGTCACGAGCCATTACGAGGTGATCCCGCGTC TGCATGCGCAGAAGCTGCTGCCGATGATCCAGCAATTGCTCGCCGATGCGGGCACCACGTTGCAAGCTGTCGACGCGATTGCCTTCGGCCGTGGCCCGGG CGCGTTCACCGGTGTGCGCATTGCCATCGGTGTGGTGCAGGGTTTGGCCTTTGCTCTGGATCGTCCGGTATTGCCGGTATCCAACCTTGCCGTGCTGGCG CAGCGTGCCTTTCGCGAGCACAGCGCAAGCCAGGTGGCGGCCGCCATTGATGCGCGGATGGATGAAGTGTATTGGGGCTGCTACCGCGAGACGGCGGGGG AGATGCGTCTGGTCGGTGCCGAAGCGGTGTTGCCGCCGGAAGTTGCGGCGCTGCCGGCCGATGCCAGCGGCAACTGGTTCGGTGCCGGTACCGGTTGGGG CTACGGCGAGCGCATCGCGGTCAATCTGAGCGGCTCCGACGCCGGCATGCTGCCCCACGCCGAAGACCTGTTGACCCTGGCGCGTTTCGCCTGGGAGCGC GGTGAGGCGATCCCGGCAGATGACGCCCAGCCGGTCTACCTGCGCGATAAAGTTGCCACCCCGAAAGCCCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTCGACACTTTCTCCTGTAGGAGCGAGCCTGCTCGCGAAGGCTTCTGGTCAGTCAATGCATGTGTTGAATGTGCAGGACCCTTCGCGAGCAGGCTCGCTC CCACAGGTTCGCTGGTCACATACAAATATCGCCAATCGTCAGTTTCTGCCCCCTCGCTTAAAACCTTTTGCGCTTTATGTGTTCTAGTTATCACTCGGCG GTTTGCTAAGTCGGTCAGGTGCCGCTAAATTGCCATCATTGATACCGAGCATGACATTATGCGTATAGACGGCGTTTCCACTCAGTCCTACCCCATCAAG CGCAAGCCGCGTAAAGGCAATGCGGCGCTGGATGAGTCCGTCGACATCATCGACGGCGAGCTGGAATTCCCGAGCGAGGAGCAACTGGCTGCTCGCGCCG CGCAAGCCACCGCGCAACGCCTGAGCAACCTGCCTGCCCGTCAACAAGACATGATCTACCACCGCGCGATGAAGAAGAGCGTAGCCATGGCGCTCGCCAG
|
|
Amino Acid Sequence |
>M22 family peptidase
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALDRPVLPVSNLAVLA QRAFREHSASQVAAAIDARMDEVYWGCYRETAGEMRLVGAEAVLPPEVAALPADASGNWFGAGTGWGYGERIAVNLSGSDAGMLPHAEDLLTLARFAWER GEAIPADDAQPVYLRDKVATPKAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|