Pseudomonas moraviensis R28-S, PMO01_01715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCTATGGCCCGCACGCCGGAAGAATTGTCGAAAAAATTCCGCTATAACCAGCGTCGCGAATTGCGCCTGCTGGAAGAAGCGGGCGGTGTGGTGCGAG CGGTCAGCGAGTTCTCCAGCGTCGAGCTGGCCGCGATGTATTGCGATCTGTTCCAGCGCCGCTGGGGCTTTCCGGCGACGGGTGCGGCGCGCATGGCCGA GGTCATCGAGTTGCTGCGCGACTTGCTGATCGGCTCGGTCATTTTCCTCAACGATGCGCCGATTGCGATTCAATTGGTCTACCGCGTTGAGGCGGCAGAA TGGATCAGTGTCGAATATGTGAATGGCGGCGTGGATCCCGAAACCCGCGAGTTCAGCCCCGGCAGCGTGCTGAGCTTTCTCAATACGCAAAGCGCCTGGG AACACGCACGGGCACTCGGCAAGCCGCTGCGTTTTTCATTCGGGCGCGCTGATCGTGAATACAAGGACCGCTGGTGCAACCCTGTGCCGGTGTTCACCGT
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| DNA Sequence for Gene |
>PMO01_01715
ATGAGCCAGACCATGAGCCGCAAACAGCAATTGCTCAAGCGCCATCGACGCAACAAGCGCGTGGCTATGTTGGTCGCGCTGGCCGCCATCATCGCGCTGA GCGTGCTGGTCGCCTGGTGGCTGGCGCCGGTGTTGCTGATTGGCGGTTGGATCGCCCATGAAGCGTGGTTTGCCGATCATCTGTTCTACGCGCCCGGCGA CGATTACCAATACAGCTTCCCGCCCTATACGCCACAGCCGAAGGTTCATCTGCACGGCGAGCAGTTGCGTCTGGATGAAGGTGTGATGCTGGCCGATGAC GCTACGCTGATCCTCGCGGTGCGAGTCAAAAGCACCTGGCTGGGGCGCTTTCTCGATCCTTGTATCGCGTTGTCGGGCGGCGCCAATCCTGACGTGCAAA CATTTGAGCGCGGTGTCGGCGGCCTGCGCTATCTGAACCTCAGCGGTCAGGCGCAAGCATTGTCCGAAGGAGTATTGCGTCTGCGCGGCCGTTTCTGTCG AGTGTCGGGCGAGCCGGTGCTGTGGGCGCTGGAACACGCTGATTATCGTCGCCAGCGGGTCATGGTCATTGCCCCTCACGCGGATGATGCGGAGCTGGCG GCGTTCGGCTTGTACAGTCAGGCCGATGAAGCCTGGATCGTTACCCTGACTGCTGGTGAAATCGAGGCCGAACACTATCAGCAGATGGGCATGAACAAGG TCGAAGCCGCGCGGCTGAAGGGACGTTTGCGCGCCTGGGACAGCCTCACCGTGCCGCAATGGGCCGGTGTCCCCCAGGAACGCTGCGTGCAGTTCGGGTA TTTCTGCCTGCAACTGGCCGCGATGCGTGACAGGCCGGATCTACCTGTGGGCTCGCGCGAAGCGGACTTGAGCGATACCCGCCTGTTCCGTCAATTCAAT CCATTTGTACTCCCGGGGGACGCCGATGGCGCGCCGACCTGGAACAATCTGCTGGCCGATCTGCGCGAAACGATGCTGCGCGCTCGTCCGGACGTCATCG TGCTGCCGCATCCGGCGCTCGACCCGCATCCTGACCACATCTGCGCGCAGCAGGCTGTGCTTGAAGTGTTGAAAGGTCTGGACTGGCAGCCGACACTGCT CGGTTATGCCAACCACCTGCACGATAACGACCGGTGGCCGATGGGTAATAGTGGTGATGGCGTGGCTCTGCCGCCAGCCTTTGATGCTGGCGTGCCGGTG CAGCCTGTATGTCTGGCGTTGTCCGCAGAGCAGCAGCGTGACAAAGCCATGGCCCTGGGCATGATGCATGACTTGCAGCCGCCTGCGCCGTTCAAGCGTC GCTTGCGTCGCAGCTTGCAGCGATTGCTGGCTGGACGCTCCGGTTCGCCTTATGGCGAAAACGAATTTTTCCGCAAGGCGGTTCGGCGACATGAACTGTT CTGGCGTTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACACAGGCGCCCGCGCAAGACTTTCTTGCGGGCGGGCATGTTCAGGTTTGCTCGGGTTGCTGTTGCGGCAAGGAAGACAATGAAAGTTCTATTTCTGG TGCAGAAAGATCAACGGGCCATTCTCGATCGGTTGTACGAGGGTGTCGCCGCCCATTGTGAGTGCGATCTGCGCTGGTTGAGCGGTGACGAGCAGCGCAA TCTGCGTCAATACTTTCGCCGCGAAGTAGACGTTTCCCGCTATGACCGCATCGTGTTTTTCCTGCGCTTCAAGCAGGAGATCCGGCAGGTCGGATTTATT CGCACCATCCCCAATCTGGTGATTCTGGAGCACGACGCCTATCAGAATTACATCCCCTGCAAGTACACCGGCAAGTTCAGTGCGCACTATCGCCGGTTGC CGTGGGCACGGGTGATCAGTTCCGGTTTCGTGGTGGCCGAGCGCCTGCGCTCGGAGGGCTTCGACGCCGTGTTCGTGCCCAAGGGCTACGATCAGACGCA
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSQTMSRKQQLLKRHRRNKRVAMLVALAAIIALSVLVAWWLAPVLLIGGWIAHEAWFADHLFYAPGDDYQYSFPPYTPQPKVHLHGEQLRLDEGVMLADD ATLILAVRVKSTWLGRFLDPCIALSGGANPDVQTFERGVGGLRYLNLSGQAQALSEGVLRLRGRFCRVSGEPVLWALEHADYRRQRVMVIAPHADDAELA AFGLYSQADEAWIVTLTAGEIEAEHYQQMGMNKVEAARLKGRLRAWDSLTVPQWAGVPQERCVQFGYFCLQLAAMRDRPDLPVGSREADLSDTRLFRQFN PFVLPGDADGAPTWNNLLADLRETMLRARPDVIVLPHPALDPHPDHICAQQAVLEVLKGLDWQPTLLGYANHLHDNDRWPMGNSGDGVALPPAFDAGVPV QPVCLALSAEQQRDKAMALGMMHDLQPPAPFKRRLRRSLQRLLAGRSGSPYGENEFFRKAVRRHELFWRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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