Pseudomonas moraviensis R28-S, PMO01_01270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTCGTTCCGTCGCGACCCGACGCTGGCTGCCAGCCATGCGGCAAAAGTGCGCTCGGCGGGCAAGCTCGGTTACTACTGGCAGCTGTTCGCCGGCCTCG GCTGGACCAGCATCCACTGGCTGCACAAGATCCATCAGCCGACGCTGGTGCTGGCCGGCGATGACGACCCACTGATTCCGCTGATCAACATGCGCATGCT CGCCTGGCGCATTCCCAATGCGCAGTTGCACATCATCGATGACGGCCATCTGTTCCTGATCACTCGCGCCGAAGCGGTGGCGCCGATCATCATGAAGTTT CTCGAAGAGGAGCGTCTGCGCGCAGTCATGCACCCGCATCCGACCCCGCTCGGCGGCTGATCGCGGCGGCCTGCTTTATGCAGCACTTTTCAAATCAAGC GCGCGGCAGGACGCCGCGCAGGCAGCAACCGGTAACAGCGTCTATGGTGTTCTGGTTCGGTGAGTGTGTTTTTGCCCTGAAGACGAAGGAGTGTTGAGTC
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| DNA Sequence for Gene |
>PMO01_01270
ATGCGCGAAAAACCAGCGACGGGCGTGGTGCCCAGCCCCGCCGTGTTTATCAACGCCCAGAGTGCGATCGCCGGTCTGCGCGGCAGGGATCTGCTGTCGA CACTGCGCAGCGTCGCCGCCCACGGCTTGCGCAATCCGTTGCACAGCGCAAAGCATGCGCTGAAGCTTGGCGGACAGCTTGGCCGCGTGCTGCTCGGCGA AACCCTGCACCCGACCAATCCGCAAGACAGCCGCTTCGCCGATCCGGCGTGGAGCCTCAACCCGTTCTACCGACGCAGCCTGCAGGCTTATCTGGCCTGG CAGAAACAGGTCAAGAGCTGGATCGATGAAGGCGACATGAGCCCTGAAGATCGTGCCCGTGCGCACTTCGCTTTCACCCTGCTCAATGACGCTGTGGCGC CGTCCAACACTCTGCTCAATCCGCTGGCGGTCAAGGAGTTGTTCAATTCCGGCGGGCAGAGTCTGGTGCGTGGCCTGAGCCATCTGTTCGATGATCTGCT GCACAACGACGGCCTGCCCCGGCAAGTGACCAGGCAGGCGTTCGAGGTCGGCAAAACCGTGGCGACCACCAGCGGATCGGTGGTGTTTCGCAATGAAATG TTCGAGCTGATCCAGTACAAATCGATGAGCGAAAAGCAGTACGCCAAACCGCTGCTGGTGGTGCCACCGCAAATCAACAAGTACTACATTTTCGATCTGA GCCCGCAGAACAGCTTCGTCCAGTACGCCCTGAAAAACAGCCTGCAGACCTTCATGATCAGTTGGCGCAATCCTGATGTGCGCCATCGCGAATGGGGCCT GTCGAGTTACGTCGAAGCGGTCGAAGAAGCGATGAACATCTGCCGGGCGATTACCGGCGCGCGTGAAGTGAACCTGATGGGCGCCTGCGCCGGCGGCCTG ACCATCGCCGCCCTGCAAGGGCACTTGCAGGCCAAACGGCAACTGCGCCGGGTCGCCAGCGCGACGTACCTGGTCAGTCTGCTCGACAGCCAGATCGAAA CCCCGGCCACGCTGTTCGCCGATGAGCAAACACTGGAAGCGGCCAAGCGTCGCTCGTACCAGCGAGGCGTGCTCGACGGTCGCGACATGGCCAAGGTCTT CGCCTGGATGCGCCCCAACGATTTGATCTGGAGCTATTTCGTCAACAACTACCTGCTGGGCAAGGAGCCGCCAGCCTTCGACATTCTCTACTGGAACAAC GACAACACCCGGCTGCCGGCGGCGCTGCACGGCGATCTGCTGGACTTCTTCAAGCACAACCCGCTGATCCACGCTGGCGGTCTCGAGGTGTGCGGTACGC CGATCGATCTGCAGAAGGTCAATGTCGACAGCTTCAGCGTCGCCGGCATGAACGACCACATCACGCCATGGGACGCGGTGTATCGCTCGACCCTGCTGCT CGGTGGCGAGCGACGTTTCGTGCTGTCCAACAGCGGCCATGTGCAGAGCATCCTCAACCCGCCGAGCAACCCGAAAGCTGCCTACGTCGAGAACGCCAAA CTGAGCAGCGACCCGCGTGCCTGGTACTACGATGCCAAACACGTCGACGGCAGCTGGTGGCCACAGTGGCTGGAATGGGTCGCGCAGCGCTCCGGCGCCC TGAATGAAACTCGCACCACCCTCGGCAATCCGAACTATCCACCGATGGAAGCGGCACCCGGCACCTATGTGCATGTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTCAACCGAAATTTTCTAAGAAGACTGGATGAAAACCCGCGACCGGATCCTCGAATGTGCACTGCAACTGTTCAACGAAAAGGGTGAGCCGAACGTTT CCACCATGGAGGTGGCCAACGAAATGGGGATCAGCCCAGGCAACCTCTACTACCACTTCCACGGTAAGGAACCGCTGATTCTCGGCCTGTTCGAACGCTT CCAGCACGAGCTCGCGCCCCTGCTCGACCCGCCACCGGACGTGGAGCTTGCACCGGAGGATTACTGGCTGTTTCTGCATTTGATCGTCGAGCGATTGGCG CAATACCGGTTCCTGTTCCAGGACCTGTCGAACCTCGCCGGCCGCTTGCCGAAACTGGCCAAGGGAATTCGCAATCTGCTCAATGCGCTGAAGCGGACGC TGGCGTCGTTGCTGGCGCGATTGAAGGCTTCGGGGCAACTGGTCAGCGATACTCAGGCGCTGGGGCAATTGGTCGAGCAGGTGACCATGACGCTGCTGTT
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| Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MREKPATGVVPSPAVFINAQSAIAGLRGRDLLSTLRSVAAHGLRNPLHSAKHALKLGGQLGRVLLGETLHPTNPQDSRFADPAWSLNPFYRRSLQAYLAW QKQVKSWIDEGDMSPEDRARAHFAFTLLNDAVAPSNTLLNPLAVKELFNSGGQSLVRGLSHLFDDLLHNDGLPRQVTRQAFEVGKTVATTSGSVVFRNEM FELIQYKSMSEKQYAKPLLVVPPQINKYYIFDLSPQNSFVQYALKNSLQTFMISWRNPDVRHREWGLSSYVEAVEEAMNICRAITGAREVNLMGACAGGL TIAALQGHLQAKRQLRRVASATYLVSLLDSQIETPATLFADEQTLEAAKRRSYQRGVLDGRDMAKVFAWMRPNDLIWSYFVNNYLLGKEPPAFDILYWNN DNTRLPAALHGDLLDFFKHNPLIHAGGLEVCGTPIDLQKVNVDSFSVAGMNDHITPWDAVYRSTLLLGGERRFVLSNSGHVQSILNPPSNPKAAYVENAK LSSDPRAWYYDAKHVDGSWWPQWLEWVAQRSGALNETRTTLGNPNYPPMEAAPGTYVHVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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