Pseudomonas moraviensis R28-S, PMO01_00835
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCTCTGGGTGCTGTTGATCTACTTCGGTACGGTCAACCTGATGCGCACCCTCGGTGAATACTTCGGCAACCCCGACCTGCAACTCAACGCCTTTGCCG CCGGTGTGATCGCACTGGGCCTGTGCTTCGGCGCGTACGCCACGGAAGTGTTTCGTGGCGCCCTGCTGGCCATTCCCAAGGGTCACCGTGAGGCCGGCCA GGCCCTGGGCCTGTCGAAGTGGCGGATTTTCACCCGTTTGATCATGCCGCAGATGTGGCGCATCGCCCTGCCGGGCCTGGGCAACCTGTTCATGATCCTG ATGAAAGACACCGCGCTGGTATCGGTCATCGGTCTGGAAGAAATCATGCGTCACGCCCAGATTGGTGTGACCGTGTCGAAACAACCGTTCACCTTCTATA TGGTCGCGGCAATCATGTACCTCGGCCTGACGGTGCTGGCGATGACCGGCATGCACTTGCTGGAAAAACGCGCCGCTCGCGGCTTTGCGAGGAGCGCGCA
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| DNA Sequence for Gene |
>PMO01_00835
ATGAACTGGGAAGTCATTATCAAGTGGCTGCCGAAACTGGCACAGGGCGCGACGCTGACACTGGAACTGGTCGCCATCGCGGTCATCGCCGGCCTGCTGC TCGCCATTCCGCTGGGCATCGCCCGGTCTTCGAAGCGCTGGTACGTGCGCTCGCTGCCTTACGCGTACATCTTCTTTTTCCGTGGCACGCCGCTGCTGGT GCAGCTGTTCCTGGTCTATTACGGTCTGGCGCAGTTCGACGCGGTGCGTGAAAGCGCTTTGTGGCCATACCTGCGCGATCCGTTCTGGTGTGCAACCGTG ACCATGACGCTGCATACGGCGGCGTACATCGCCGAGATCCTGCGTGGAGCCATTCAGGCCATTCCACCCGGTGAAATCGAAGCCGCGCGGGCCTTGGGCA TGTCCCGGCCCAAAGCGATGTTCTACATCATCCTGCCCCGTGCCGCGCGCATCGGCCTGCCGGCCTATAGCAACGAGGTGATCCTGATGCTTAAGGCCAG CGCTCTGGCCAGCACCGTGACCCTGCTGGAACTGACCGGCATGGCCCGCACGATCATCGCCCGCACTTATCTGCCGGTGGAGATCTTCTTCGCCGCCGGT GTGTTCTATCTGGTCATGGCTTACGTGCTGGTACGCGGCTTCAAGCTGCTGGAGCGCTGGCTGCGCGTCGATGCCTGCCAAGGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACTTCCCACGTGCTGACGGGCGAGGCCCTACTCGCCCGCTTCACCGCGCTGGATGCTTTCTTGATTAAGCATCAGGCGCTGTGGAAACCTCGGCCGTTC ACTCACCTACAACTTCCATGGGAAGCATCCTACCCGGAGTTGTCTGCGTGGCTACGCGGGCGGTCGCTGGAAGATGCAGAACGCGCGCATAACCATCCTG CTGATCTTGTCGATGCGCCAGAGCCGTTCGCTTCATTGGCGAAGTTGTCGGCAGAGTTGAGCGCGGTCGGTGAGTTGCCAGGGCATGCGCTGGAACCTGC GGGCCATCGATTGAATGTCGATGTTCCAGGGCGCAAGTGGCAGCAGATTGAAGCGTTTGCCAGTCGTTTGTCTTTCGCCTCGCAGCCGACGCATTGGCTG GACTGGTGCTCCGGCAAAGGGCATCTGGGACGCCGCCTGTTGGGTGCCGGGCAACAATTGACTTGCGTTGAATACGATCCTTTATTGGTCGCCAGCGGTC
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| Amino Acid Sequence |
>ABC transporter permease
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKRWYVRSLPYAYIFFFRGTPLLVQLFLVYYGLAQFDAVRESALWPYLRDPFWCATV TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRPKAMFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAG VFYLVMAYVLVRGFKLLERWLRVDACQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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