Pseudomonas mendocina NBRC 14162, PME1_RS00025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGTACCGTTCGAGACCGATGAAGAGCGCGAGTGCGCGCAAGGCGTGGGCGGCTATGCCCGTCCCATGCCGCAGTCCTGGATGGAGCGCCAGGCCAAGG CCGTGCACGAACGCGCCAAGCAGGCCGACATCGTCATCACCACGGCGCTGATTCCGGGTCGCAAGGCACCCATCCTGCTGCACGAAGCCACTGTGCAAGA GATGAAGCCGGGCTCCGTGGTCATCGATCTGGCCGCTGCGCAAGGTGGCAACTGCCCGTTGACCGAGGCCGATCAGGTCGTGGTCAAGCACGGCGTGACC CTCGTCGGCCACACCAACCTGGCCGCACTGGTACCGGCAGACGCTTCCGCCCTGTATGCACGCAACCTGCTGGACTTCCTCAAGCTCGTGATCGACAAGG AAGGCCAGTTCCAGCTCAACCTAGAAGACGACATCGTCTCGGCTTGCCTGATGTGCAATGCCGGCGAAGTCGTGCGCAAGAACGGCTAAGGAGTAGAGAC
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| DNA Sequence for Gene |
>PME1_RS00025
ATGGATCTGATTTCCGACGGCATCTACAACCTGATCATCTTCGTGCTGGCCATCTATGTCGGCTACCACGTGGTGTGGAACGTCACCCCGGCCCTGCACA CCCCGCTGATGGCCGTGACCAATGCCATTTCCGCCATCGTGATCGTCGGCGCCATGCTCGCCGCCGCACTGACCGTCACCCCGCTGGGCAAAGCCATGGG CACCCTGGCCGTGGCGCTGGCTGCGGTCAACGTGTTCGGCGGCTTCCTGGTCACCCGACGCATGCTGGAAATGTTCAAGAAGAAGGCGCCGAAAGCGCAG GTGGAGAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATGAGCATGAACCTGATCACTGTTCTCTACCTCGTCGCCTCGGTGTGCTTCATCCAGGCGCTCAAGGGCCTGTCGCACCCGACCACGTCACGGCGCGG CAACCTGTTCGGCATGGTCGGCATGGCACTGGCAGTGGCCACCACCGTCGGCCTGATCTACAAGCTCGGCGCCGAACTGGCCGTGCAGGGCATTGGCTTC GTCATCGTCGGCCTGCTGGTCGGCGGCACTGCCGGCTCGATCATGGCCAAACGCGTGGAAATGACCAAGATGCCGGAACTGGTCGCCTTCATGCACAGCA TGATCGGCCTGGCTGCCGTGTTCATCGCCATTGCCGCCGTCGTCGAACCGCAATCGCTGGGCATCGTCGCCGCGCTGGGTGATCCCATTCCGGCCGGCAA CCGCCTGGAACTGTTCCTCGGTGCCGCCATCGGCGCCATCACCTTCTCCGGCTCGGTCATCGCCTTCGGCAAGCTGTCCGGCAAGTACAAGTTCCGCCTG
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| Amino Acid Sequence |
>NAD(P) transhydrogenase
MDLISDGIYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVTRRMLEMFKKKAPKAQ VEKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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