Pseudomonas mendocina NBRC 14162, PME1_RS05770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTAAACTGGCGATCTTCGACGTCGACGGCGTCCTCACCGACGGACGCCTGTACTTTCTCGAAGACGGTAGTGAATTCAAGACGTTCAACACGCTCGACG GCCACGGCATCAAGATGCTAATCAACTCGGGCGTGCGCACTGCCATCATCAGCGGACGCAAGACCCCGGTAGTCGAACGCCGCGCCAACAACCTCGGTAT CCAGCATCTGTTTCAGGGCCGAGAGGACAAACTCGTGGTGCTCGACGGCCTGCTCGCCGAACTCGGCCTAAGCTATGAAGAGGTCGCCTATCTGGGCGAC GATCTGCCGGATCTTCCAGTGATCCGCCGGGTCGGATTGGGCATGGCCGTGGCCAGCGCTGACAGCTTCGTGCGCCAGAACGCCCATGGTGTAACCCAGG CCCGCGGCGGCGACGGTGCGGCGCGGGAATTCTGCGAACTGATCATGCGCGCCCAGGGCACACTGGATGCGGCCCAAGCCGCCTACCTCTAGAGAACAGC
DNA Sequence for Gene
>PME1_RS05770
ATGCCGCGTAAAATCCTCAATATTCTGATATTCGCCCTGATTGCGATCGTGGTGGCCGCCCTCGGCTACTGGAACCTAGCGCCGGACAGCGCCCGCGTAA CTCAACAGAGCGGCGACGACAACGTCGTCGACTTCTATGTGATGGGCGCGCGCACCGTGCAATTCCAGGACGACGGCAAGGTGCACTACCGCATGACTGC GGACAAGCTCGAACACGTCAAGAACACCGACATCACTCTGGTAGACACGCCCAAGCTGGACCTCTATCGCGGCACAGAACTGCCGTGGAAAGTCACCAGC CAGCGTGCCGAAGTCTCACCTGGCGGCGTCGAGGTAGAACTGATCGACGACGTGCGCATCGCCCGCACCGATGCCAAGAACCGTCCAACTATCATCACCA GTAGCCGCATGACCGTTATTCCTGACAAGGAATATGCGCAGACCGAGCAAGCCGTTAGAATCGTCGCGGCCAACGGGGTGACCACGGCACAAGGAATGAA AGCGTACTTGAATGACGGCAGGATGCTCCTGCAGTCCAACGTAAGAGGCCAGCATGAGGTTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACCCTCCCCCTGATTCTCAGCCTCGGCGCCGCATTGGGAAGCGCGGCTGCCTGGGCACTGCCATCGGATCGAGACCAGCCGATTCGCATCCAGGCCGAC AGCGCCGAACTGGATGACAAGCAGGGCGTCGCCGTGTACCGGGGTGACGTGATCATCACCCAGGGCACCCTGAAGATCACCGGCGACACCGTGACCATCA CGCAGACCGCCAGCGGCGATATCGACGTCTTCACCTCGGTGGGCAACCTGGCTTACTACGAGCAAAAGCCAGCCGTGGACAAGGACATCGTCAAAGCCTA CGGCAAGACCATCCAGTATTTCGCCAGCAACGAGCGCATCGTGCTGATCGATCAGGCCAAGGTGATCCAGGAAGGTATCACCTTCGAAGGCGAGAAGATC GTCTATGACACCCGCCGCCAGATCGTCAATGCCGGTCGCGCCACGGGCGGCAACGTCAGCACGCCGCGCCCGCGCATCGACATGGTCATCCAACCGAAGA
Amino Acid Sequence
>LPS ABC transporter permease
MPRKILNILIFALIAIVVAALGYWNLAPDSARVTQQSGDDNVVDFYVMGARTVQFQDDGKVHYRMTADKLEHVKNTDITLVDTPKLDLYRGTELPWKVTS QRAEVSPGGVEVELIDDVRIARTDAKNRPTIITSSRMTVIPDKEYAQTEQAVRIVAANGVTTAQGMKAYLNDGRMLLQSNVRGQHEVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site