Pseudomonas mendocina NBRC 14162, PME1_RS03685
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGAAAGTCTGCCCTTGGCACTGGCGCTGATCGACCTCGACCATTTCAAACGACTCAACGACGAGTGTGGCCATCTGGTCGGCGACGATGTACTCAAGG CCGTGGCGCAGCACCTGCTGGACAACCTGCGCAGCACCGATGCCGTGTTCCGTATCGGTGGTGAGGAGTTTCTGCTGATATTGCCAGGGTTGGATGCCCA GGCTGCGGAAGTGCGCCTCGAATCGTTGCGCCTGCAGTTGGCCGACATGGACCAGCCGACGCGCATAGGCGCGCTGCCAGTGACACTGTCTGCTGGAATA GCCGTATGGCCCACCAATGGCGAGAAACTTGATGAGCTGTTGCAAGCAGCAGATATGGCTCTTTATTCAGCCAAGCGAGGAGGAAGGAACCGTATAGCTT TGGCTTCATAGAGTGAATATCGCAGCCAACTGGATGTTTTTCAGCGCAGGAGTCGCTACATTTGTTGTGAAGTTCATTCCAACAACAATAAGGACTTGCC
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| DNA Sequence for Gene |
>PME1_RS03685
ATGAAACGTCTGCTCAAACCGCTGGCAGCTGCCTGTTTGCTGGCTAGCGCTTATCCTCTTTACGCTGCTCCCTACAGTGCATTGTATGTATTTGGTGACA GCCTCAGTGATGCAGGCTGGTTTGCTGATGCTGACGGCCCTGCTGGTGCTACTACCCGTTTCACCAATCGAGTTGGCCCTACCTATCAGGACGGAAGTGG CGAAGTGTTCGGTCCGGTGGCGCCCATGCTGCTTGGCGATGCTCTTGGCTTGGACGGAGCAGGTCTGGGGCCGGCAAATTCGGTTGAGGGTGGCAACAAC TGGGCGGTTGGTGGTTATCGTACAGACCAGATACTCAATAGCATTACTGGTCCAGGTGGATACCTGGCGTCCAGCGGCGGGCGTGCCGACCCCAATGCGT TGTACTACCTCACCGGGGGCGGTAACGACTTTCTTCAGTTCCGTGTAGTCGACACTGCCAGCGCGCAAGCGGCTGCCGGTCGACTGGTCGAAAGCGTCGA GGTTCTGCAGCAGGCAGGTGCGCGCTACATCATGGTGTGGCTGCTGCCGGATATCGGTCTGACACCGAATTTCTACGGTGGTGGACTGCAGGACTTCGTT TCCGGCCTGGGAAGCGACTTCAACCAAGAGGTGGTAAGTCAGTTGGCAACGGTCAATGCCAATGTGATTCCGCTGAATATCCCGCTCAATCTTTCGGAAA CTTTGGCTGATCCCGGTCGTTACGGCCTGGTCAATGACCGCGATGCGGTAATCGGGAGCTGCTTCGATGGTTGCAGCAACCCACATCCGGTTTACGGGAT TAATGGCACTGCCCCTGACCCGACCAAGCTACTGTTCAACGATAGCGTTCATCCGACGATCGCTGGGCAGCGTATCATTGCAGACTATGCCTACTCGCTT CTCGCGGCACCGTGGGAGGTCACGCTTCTGCCTGAAATGGCGATGGGGACGCTTCGTGGTCACCAGGACCAATTGCGAGCTCAATGGCTTGCCGATTGGG AAGCGTGGCAAGGGGTAGGGCAGTGGCGTGCTTTCATCAATACGGGCGGCCAACGACTGGATTACGATCTGCAGCGTGGCGATGCCGATGGCAATGGCTA CAGCCTCAACTTCGGAACCAGTTATCGACTCGATGACGCTTGGCGTCTGGGGGTGGCTGCCGGCCTCTACCAGCAGAGTCTGGAAGCGGGTGCCGCAGAC TCCGATTACGATCTGCGTAGCTACTTGGGTACCGCATTTGCGCAGTATCAGCACAATCGCTGGTGGGGCGATCTGTCTGCCAGTGTCGGTCGTCTCGACT ACGATGATCTCAAGCGGAAATTTGCTATTGGTCCTGCCACCAACTCGGAAAAGGGCGATACCGATGGCAATCTGTGGGCGGTTAGTGGTCGCTTCGGCTA CGACATCGCTCAGCCGGGCAGCCAGTGGCACTTGAGCCCTTTCCTGAGCGCCGACTATGTGCGGATCGAAGTGGACGGCTATGCTGAGGCTGGTCAACGC TCCACGGCCCTGACTTACTCTGACCAAGTGCGTAAATCCAAACGTCTGGGTGCAGGCCTGCAGGGTCTTTACGATCTCACTCCGCAAACTCGGTTGTTCG GTGAGTTGGCGATGGAGAGAGAATATGAAAACGACCCAAGCGAAGTGCGTATGGCTCTGAATAGCCTGCCTGGGATTGGTTTTGAACTACCAGGCTATCA ACCCGATGACCGGATGTGGCGTGGCCATGTCGGCGTTAGCCACAGCTTGGGGAACGGCTTGTCGCTACGTGGTAGCTATAGCTACCGGCATGCAGACGAT GAAGCCCAGCATGGTTTGAATCTTTCCTTGTCACTAGAGCTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGTCGTTTTCGAGGCCAACTTACTCTCCTATTAGTCGGTCCTAAGTGCGCTTTGTCATTTTCTCCTGCTCGTCGTGGCCTCAGGGAGGCGGCCATGGCG GGAACGGGTTAAACTGCGCGCGTTTTTTCCCTTTCCGGAGCCGTCCATGTCCCGTGTCACCCTGAGCCGCTACCTGATCGAGCAGACTCGCAGCCACAAC ACCCCGGCCGACCTGCGTTTCCTTATCGAAGTCGTGGCGCGTGCCTGCAAAGCGATCAGCCATCAGGTTTCCAAGGGCGCCCTCGGCGGCGTACTGGGCA GCCTGGACAGCGAGAACGTGCAGGGTGAGGTGCAGAAGAAGCTCGACGTGATTTCCAACGAGATTCTGCTCGAAGCCAACGAATGGGGCGGCCACCTGGC CGGTATGGCGTCCGAGGAAATGGACAACGCCTACCAGATTCCCGGCAAGTACCCCAAGGGCGCCTACCTGCTGGTATTCGACCCGCTGGACGGCTCCAGC
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| Amino Acid Sequence |
>esterase
MKRLLKPLAAACLLASAYPLYAAPYSALYVFGDSLSDAGWFADADGPAGATTRFTNRVGPTYQDGSGEVFGPVAPMLLGDALGLDGAGLGPANSVEGGNN WAVGGYRTDQILNSITGPGGYLASSGGRADPNALYYLTGGGNDFLQFRVVDTASAQAAAGRLVESVEVLQQAGARYIMVWLLPDIGLTPNFYGGGLQDFV SGLGSDFNQEVVSQLATVNANVIPLNIPLNLSETLADPGRYGLVNDRDAVIGSCFDGCSNPHPVYGINGTAPDPTKLLFNDSVHPTIAGQRIIADYAYSL LAAPWEVTLLPEMAMGTLRGHQDQLRAQWLADWEAWQGVGQWRAFINTGGQRLDYDLQRGDADGNGYSLNFGTSYRLDDAWRLGVAAGLYQQSLEAGAAD SDYDLRSYLGTAFAQYQHNRWWGDLSASVGRLDYDDLKRKFAIGPATNSEKGDTDGNLWAVSGRFGYDIAQPGSQWHLSPFLSADYVRIEVDGYAEAGQR STALTYSDQVRKSKRLGAGLQGLYDLTPQTRLFGELAMEREYENDPSEVRMALNSLPGIGFELPGYQPDDRMWRGHVGVSHSLGNGLSLRGSYSYRHADD EAQHGLNLSLSLEL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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