Pseudomonas mendocina NBRC 14162, PME1_RS06990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGGCAGCCAGCTGGCACCCGACGCCGACGGTGTGCCGGTGCAGGTGCTCGACAGCAGCGGCAAGGCCTACGGGCTGAGCGGCAAGATCCTGTTCTCCGG CATCAGCGTGGATGCCGGCACCGGCAACGTGTTGCTGCGTGTACAGGTCGACAACCCCAACCGGCAACTGCTGCCCGGCATGTACGTGCTGGCGCGGGTG CCGCGGGCGCACTACGCCGATGCCCTGAGTGTGCCGCAACAGGCAGTGTTGCGCCGTGACGGCCAGGCCAGCGTGTGGGTGCTGGGCGAGGATGAGCAGG TGCAGCGCGTGCCGGTCGAGCTCGATGAGCTGGTGGGTCGTCGTTATCGCATCGTCAGCGGCCTTAGCGCCGGCCAGCGGGTGGTGATCGAAGGGCTCGA TCGCCTGGCCGAGGGCGCGCCGGTCAAGGCGCGGCTGTGGCAAACCGGCACCGCGAGCGAGCTGGCCAGCTCGTCCGCGCGCTGATCGGGAGAAACCCAA
DNA Sequence for Gene
>PME1_RS06990
ATGCCTCAGTTCTTCATCAACCGTCCGGTGTTCGCCTGGGTGATCGCCCTGTTCATCGTGCTGTTCGGCTCAATCGCCATTCCGCAACTGCCGATTGCCC GCTACCCCTCGGTGGCGCCGCCGTCGGTGGCGCTGTACGCCACCTACCCGGGCGCCACGCCCAAGACCCTCAACGATTCGGTGGTCAGCCTGGTCGAGCG CGAGCTGTCCGGGGTCAAGAACCTGCTCTACTTCGAGTCCTCGGTTGACACTTCGGGCACTGCGCAGATCACTGCCACCTTCAAACCGGGCACCGATCCC GAACTGGCTCAGGTGGACGTGCAGAACCGCATCAAGGCGGTCGAGCCGCGCCTGCCCCAGGTGGTACGCCAGAGCGGCTTGCAGGTGGAGTCCGCCGCCT CGGGCTTTCTGATGATGATCGGCATGACCTCGCCGGACGGCCAGTTCGACGAGGTGGTGCTCGGCGACTACCTGGCGCGCAATATCGTGCCGGAGCTGCG CCGTATCGAGGGCGTCGGCCGTGTGCAGCTGTTCGGTGCCGAGCAGGCGCTGCGCATCTGGGTCGACCCCAACAAGCTGACCGCTTTCGGCCTGACCATG GGCGATCTGTCCCAGGCCATCGAGCAGCAGAACGCGCAGATCGCCCCCGGTCGGCTCGGTGACGAGCCGGCATTGCCGGGGCAGCGGCTGGCCGTGCCGC TGACCGTCGAGGGCCAGCTGGAAACGCCCGAACAGTTCGCTGCCGTGGTGCTGCGCTCTACTGCCGATGGCTCGCGGGTGACCATCGGTGATGTCGCGCG GGTCGAGCTGGGCGCCCAGTCCTACGGTTTTTCCAATCGTGAGAACGGCGTGTCGGCGACCAGCGCTGCCATTCAGCTATCGCCCGGTGCCAACGCCGTG CGCACGGCCCAGGCGGTACGTGACCGGCTCGCCGAGCTGGCGCCGAGCATGCCTACCGGCATGAGCTATTCGGTGCCGTTCGACACCGCGCCGTTCGTCA AGGTATCCATCGAGAAGGTGATCTATACCCTGCTCGAGGCCATGGTGCTGGTGTTTCTGGTGATGTTCCTGTTCCTGCAGAACATGCGCTACACGCTGAT CCCGGCCATCGTCGCGCCCATCGCGCTGCTCGGCACTTTCGCGGTGATGCTGCTGGCCGGCTTCTCGATCAATTCGCTGACCATGTTCGGCATGGTGCTG GCCATCGGCATCATCGTCGACGACGCCATCGTGGTGGTCGAAAATGTCGAGAGGCTGATGGCTACCCGCGGCCTGTCGCCGCGCGAGGCGACCCTGCAGG CGATGAAGGAGATCACCGGCGCGGTAATCGGCATCACCCTGGTGCTCACCGCGGTGTTCATTCCCATGGCTTTCGCCAGCGGTTCGGTGGGGGTGATCTA CCAGCAGTTCACCCTGTCGATGGCGGTGTCGATCCTGTTCTCGGCGTTCCTGGCGCTGACCCTGACGCCAGCGCTGTGCGCCACGCTGCTGCGTCCGGTC AGTGCTGACCACCACGAAAAACGTGGCTTCTTCGGTGCCTTCAATCGCGGTTTCGAGCGCCTGACCGAGCGCTACACCGGGCGCGTTAGCCGGCTGGTCG GGCGCAGCGGGCGGATGATGCTGGTATTCGCGCTGCTCTGCGGCGTGCTGGCCATCGCCGGGCAGCAGCTACCGTCGTCGTTCCTGCCGGAGGAGGATCA GGGCTATTTCATGACCTCCATCCAGTTACCGACGGGCGCCACCAGCGAGCGCACCCTGGATGTAGTCAAGCGCTTCGAGGCCCACGTGGCCACGCGCCCG GCGCTGGACACCAACATCGTGGTGCAGGGCTTCAGCTTTTCGGGTTCCGGCACCAACGCGGCGATGGCCTTCACCATGCTCAAGGATTGGGATCAGCGCA ACGGCGCTACTGCCGCCGAGGAAGCGGCGCTGGCCCAGGAGGCCATGGCCGACAACGTAGAAGGCACGGTGATGAGCCTGATGCCGCCGGCTATCGACGA ACTCGGCACCTCGTCGGGCTTCACCCTGTTCCTGCAGGATCGCGCTAACCGTGGCGAAGCCGCGCTGCTCAAGGCCCAGGCCCAGCTGCTGGAGCTGGCC GGGCAGAGCCGGGTGGTCAGCGATGTGTACCCCGATGGTCTGCCGCCAGGCGAGAGCATTCGCCTGAACATCGACCGCCAGAAGGCCGAGGCCATGGGCC TGTCGTTCGCGGCGGTGAGCAGCACGCTGTCGGCAGCCATGGGCTCGCAGTACGTCAACGACTTCCCCAATGCCGGGCGCATGCAGCAGGTGATCCTGCA GGCTGACGCCCCGGCGCGCATGCAGCTCGACGATGTGCTCAGCCTGCGCGTGCGCAACGCCAGCGGCGGCATGGTGCCGCTGCGCGAAGTGGTAACGCCG GTGTGGAGCGAGTCGCCGCAGCAGATGATGCGCTTCCAGGGCTTCCCGGCGGTGCGTATTGCCGGCGGCGCGGCGCCTGGCGTTTCCAGCGGCGCGGCAA TGGCCGAGATGGAGCGCCTGGTCGCCCAGTTGCCTCAGGGCTATGCGGTGGCCTGGACGGGCCAATCACTGCAGGAGCGCCAGTCGGCGGCCCAGGCACC GATGCTCATGGCGCTCTCGGCGCTGGTGGTGTTCCTGGTGCTGGCGGCGTTGTACGAGAGCTGGTCGATTCCTTTGTCGGTGATGTTGGTGGTGCCCCTC GGTCTGCTCGGCGCGGTAGCGGCGGTGATGTTGCGCGGTCTGCCCAACGACGTGTTCTTCAAGGTGGGGATGATCACCATCATCGGCCTGTCGGCGAAGA ACGCCATCCTGATCGTCGAGTTCGCCCGTCAGCTGCATGGCGAAGGTCGCTCGCTGGTGGACGCCGCGGTGACCGCCGCGCGGCTGCGTCTGCGCCCGAT TCTGATGACCTCGCTGGCCTTCACCCTGGGGGTGGTGCCGTTGATGCTCGCCGCCGGCGCCAGCGCTGAGACCCAGCACGCCATCGGCACCGGCGTGTTC GGCGGCATGCTCAGCGGCACCCTGCTGGCGGTGTTCTTCGTGCCGTCGTTCTTCGTATTCGTGATGGGGCTGCAGGAACGCTTTCAGGCTTGGCGCGCAC AGCGCACCGCCGCAGTGCCGCAGCCTGGTGAGGAGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCATGCGTTATTTGATGGTAGTCGCCCTAGTCACCGGCGTGTCGGCCTGTTCCATGACGCCCGAACTGGAGCGCCCGGCGCCACCGGTGCCGGCTAGCTT TCCAGAGGCTGCTGCGCTGCAGGGCGCCGCCGTGCCAGCCAGCGAAATGGGCTGGCGCACGATGTTCGCCGACCCGCAGTTGCAGCGCCTGATCGAGCTG GCGCTGGTGCATAACCGCGATCTGCGCCTGGCCGCGTTGAACGTCGATGCCGCGCGCTCGATGTTCAATATCCAGCAGTCCACGCGCCTGCCGTCGGTGT CGCTGGATGCCAGCCGCACTCGGGAGCGTGCCCTGGCGCAGGACAACAGTGGTGAGTCGCGACGCGAGGTGAGCAACCAGGTCGCCGTGAATGTCGGCGT CAGCGCCTTCGAGCTGGATCTGTTCGGCCGTGTGCGCTCGTTGTCCGATGCGGCGCTGGCCCGTTACCTGGCCAGTGAGCAGGGCCGCGATGCGGCGCAG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MPQFFINRPVFAWVIALFIVLFGSIAIPQLPIARYPSVAPPSVALYATYPGATPKTLNDSVVSLVERELSGVKNLLYFESSVDTSGTAQITATFKPGTDP ELAQVDVQNRIKAVEPRLPQVVRQSGLQVESAASGFLMMIGMTSPDGQFDEVVLGDYLARNIVPELRRIEGVGRVQLFGAEQALRIWVDPNKLTAFGLTM GDLSQAIEQQNAQIAPGRLGDEPALPGQRLAVPLTVEGQLETPEQFAAVVLRSTADGSRVTIGDVARVELGAQSYGFSNRENGVSATSAAIQLSPGANAV RTAQAVRDRLAELAPSMPTGMSYSVPFDTAPFVKVSIEKVIYTLLEAMVLVFLVMFLFLQNMRYTLIPAIVAPIALLGTFAVMLLAGFSINSLTMFGMVL AIGIIVDDAIVVVENVERLMATRGLSPREATLQAMKEITGAVIGITLVLTAVFIPMAFASGSVGVIYQQFTLSMAVSILFSAFLALTLTPALCATLLRPV SADHHEKRGFFGAFNRGFERLTERYTGRVSRLVGRSGRMMLVFALLCGVLAIAGQQLPSSFLPEEDQGYFMTSIQLPTGATSERTLDVVKRFEAHVATRP ALDTNIVVQGFSFSGSGTNAAMAFTMLKDWDQRNGATAAEEAALAQEAMADNVEGTVMSLMPPAIDELGTSSGFTLFLQDRANRGEAALLKAQAQLLELA GQSRVVSDVYPDGLPPGESIRLNIDRQKAEAMGLSFAAVSSTLSAAMGSQYVNDFPNAGRMQQVILQADAPARMQLDDVLSLRVRNASGGMVPLREVVTP VWSESPQQMMRFQGFPAVRIAGGAAPGVSSGAAMAEMERLVAQLPQGYAVAWTGQSLQERQSAAQAPMLMALSALVVFLVLAALYESWSIPLSVMLVVPL GLLGAVAAVMLRGLPNDVFFKVGMITIIGLSAKNAILIVEFARQLHGEGRSLVDAAVTAARLRLRPILMTSLAFTLGVVPLMLAAGASAETQHAIGTGVF GGMLSGTLLAVFFVPSFFVFVMGLQERFQAWRAQRTAAVPQPGEEQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site