Pseudomonas mendocina NBRC 14162, PME1_RS06915

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCAGATCCGCAAGATGATCGCCTCCTATGTCGGCGAGAACGCCCTGTTCGAGCAGCAACTGCTGTCCGGCGAGCTGGAAGTCGAACTCACCCCGCAAG GCACCCTGGCCGAGAAGCTGCGCGCCGGCGGCGCCGGCATCCCCGCCTTCTTCACTGCCACCGGCTACGGCACCCCGGTCGCCGAAGGCAAGGAAGCGCG CGAGATCGATGGCCGCCACTACATCCTCGAGCCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCACTTCGGTAACGTGGTCTAC CGCCACACCGCGCAGAACTTCAACCCGGTGGTCGCCACCGCCGGGCGCATCACCGTGGTCGAGGTCGAAGAGATCGTCGAGCCCGGTGAACTCGACCCCA CGCAGATTCATACCCCTGGCATCTACGTCGACCGGCTGATCTGCGGCAGCTTCGAGAAACGCATCGAAAAACGCACGCTGCGCGCCTGAGGAGAAAGACC
DNA Sequence for Gene
>PME1_RS06915
ATGGCTCTTACCCGTGAACAAATGGCCCAGCGCGTGGCCCGCGAGCTGCAGGACGGCTTCTACGTCAACCTCGGCATCGGCATTCCCACCCTGGTCGCCA ACTACGTACCCGAAGGCATGCAGGTGATGCTGCAGTCGGAGAACGGCCTGCTCGGCATGGGCGCATTTCCGACCGAAGATGAAGTGGATGCCGACATGAT CAACGCCGGCAAGCAGACCGTCACCGCGATCAAGGGCGCAGCTATCTTCGACTCGTCACAGTCCTTTGCCATGATTCGTGGCGGCCATGTTGACCTGACT GTACTTGGCGCCTTTGAGGTGGACGTGCGCGGCAACATCGCCTCGTGGATGATCCCCGGCAAGCTGGTCAAAGGCATGGGCGGCGCCATGGACCTGGTGG CCGGTGCCGACAACATCATCGTCACCATGACCCACGCCTCGAAAGACGGCGAATCCAAGCTGCTGGAGCATTGCAGCCTGCCGCTGACCGGCTGCGGCTG CATCCGCAAAGTGTTGACCGACCTGGCCTATCTGGAGATCGAAAACAACGCCTTCGTCCTGCGCGAACGTGCGCCGGGTGTTAGCGTCGAGGAAATCGTG GCCAAGACCGCCGGCAAGCTGATCGTCCCCGAACACGTGCCAGAAATGAGCTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTGTCTACCGTTCTGTAGGCGCCACCACGCACGGCGCCTACAGAGCGTTTTTTGGCTATGTCCTACACCCTGTAGGAGCGGATTCATCCGCGAAGCTTT TTCCGCCCTACCGCGCCAAGAGGATTTCCCATGCAAGACGTCGTCATCGTCGCCGCCACCCGCACCGCCATCGGCAGCTTCCAGGGCAGCCTGGCTGATA TCCCCGCGCCCGAGCTCGGCGCCATCGTCATCAAGCGTCTGCTGGAGCAGACCGGCCTCGATGCCGCCCAGGTCGATGAAGTGATCCTCGGCCAGGTGCT CACCGCAGGCAGTGGCCAGAACCCCGCGCGCCAGGCCGCCATCCGCGCCGGCCTGCCGCATGCCGTGCCTGCCATGACCCTGAACAAGGTCTGTGGCTCG GGCCTTAAGGCCTTGCACCTGGCCACCCAGGCTATTCGCTGCGGCGACGCCGAGGTGATCATCGCTGGCGGCATGGAAAACATGAGCCTGGCGCCCTACG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELQDGFYVNLGIGIPTLVANYVPEGMQVMLQSENGLLGMGAFPTEDEVDADMINAGKQTVTAIKGAAIFDSSQSFAMIRGGHVDLT VLGAFEVDVRGNIASWMIPGKLVKGMGGAMDLVAGADNIIVTMTHASKDGESKLLEHCSLPLTGCGCIRKVLTDLAYLEIENNAFVLRERAPGVSVEEIV AKTAGKLIVPEHVPEMSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site