Pseudomonas mendocina NBRC 14162, PME1_RS09575
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0015628 | protein secretion by the type II secretion system |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01710
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0015627 | type II protein secretion system complex |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01710
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.700.10 | Glycoprotein, Type 4 Pilin | - | - | 8 | 126 | 2.1E-42 |
| Pfam | PF08334 | Type II secretion system (T2SS), protein G | IPR013545 | Type II secretion system protein GspG, C-terminal | 17 | 126 | 7.5E-44 |
| FunFam | G3DSA:3.30.700.10:FF:000001 | General secretion pathway protein G | - | - | 8 | 126 | 2.3E-60 |
| SUPERFAMILY | SSF54523 | Pili subunits | IPR045584 | Pilin-like | 21 | 127 | 6.8E-40 |
| NCBIfam | TIGR01710 | JCVI: type II secretion system major pseudopilin GspG | IPR010054 | Type II secretion system protein GspG | 1 | 127 | 1.3E-55 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.