Pseudomonas mendocina NBRC 14162, PME1_RS09965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCGAAGTGATCTCTGCCGGCGTCATCGATGATCAGGTGCAGAGTCAGGCGGTGACCAAGCATGTGTTGATCGTCGATGACTCTTCGGTGGCGCGTAAGC AGGTTTCGCGCTGCCTGCAAACCGTAGGAGTCGAGGTGACCGCGCTGAATGATGGCCGTGAGGCACTCAATTATCTGAAGAAAATGGCAGACGAGGGGCG CTTCCCCGACAAGGAACTGTTGATGCTGATTTCCGATATCGAGATGCCCGAGATGGACGGATATACACTGACGACTGAGATTCGTAGCGATCCGCGCATG CAGAAGCTGCATATCCTCCTGCATACTTCACTTTCTGGTGTATTCAACCAGGCGATGGTGAAGAAGGTCGGGGCTGACGACTTCCTGGCCAAATTCAAGC CGGATGATCTGGCGGCGCGTGTTGTCGATCGCATTCGTGTATCGGATGGGGGCTGAAGGGGCAACCTTCAGCGAATGTAATGGTAGGTGAGGCGGCACTA
DNA Sequence for Gene
>PME1_RS09965
GTGTCTTCAGGTAATTTGGATTTTGAGCAGTTCCGGACTTTCCTGGAAAAGGCCTGCGGTATTCTGCTTGGCAGCAACAAGCAGTACCTGGTTTCCAGCC GTCTGAACAAGCTGATGGAACAGAACGGCATCAAAACCCTGGGCGAGCTGGTGCAGCGCATGCAAAGCCAGCCGCGTGGGGGGCTGCGCGAGCAGGTGGT AGATGCCATGACCACCAACGAGACCTTGTGGTTTCGCGACACCTACCCCTTCGAGGTGCTCAAGAATCGTGTGCTGCCTGAGCTGATCAAGGCCTATCCG GCCCAGCGCCTGCGTATATGGTCCGCGGCCTGCTCTTCCGGCCAGGAGCCGTACTCGCTGTCGATGTCCATCGATGAGTTCGAGCGCAGTAATCTCGGTC AGCTCAAGGCTGGCGTGCAGATCGTTGCCACCGATCTTTCGCCTTCGATGCTGGCCAACTGCAAGTCCGGCGAGTACGACAGCCTTGCCATGGGGCGCGG CCTTTCTCAGGAGCGCCTGCAGCGTTATTTCGACCCCAAGGGGCCGGGACGCTGGCAGGTCAAGGCGCCGGTCAAGAGTCGTGTTGAGTTTCGCCCGCTC AATTTGCTGGACAGCTATGCTGCGTTGGGCAAGTTCGACATCGTGTTCTGCCGAAATGTCCTCATCTATTTTTCGGCTGAGGTGAAGAAGGACATTCTTA CGCGTATCCATGCCACCCTGAAACCGGGCGGCTACCTGTTCCTTGGCGCCTCTGAGGCCCTCAACGGCCTGCCGGACAAATACCAGATGGTGCAGTGCAG CCCTGGGATCATCTACAAGGCGAAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCTAGGCGCGTTCGCAATCAGCAACGGGAGGCCATATGGCCTCCCGTTTGCGTTTCTGAGGTCTGAAAACGGTAGGCGCGCGTGTACACCAGCCGTTTG GCGTGTTGCTTACAGGCCGGCACCCTGCGGTTCGGCGGGGCGGCAATCTGTCCGATTGGCTTTGCCGTTTACTTGCCCGTAGGCGGAAAGGCCTTGCCGC TTTGCCGCTTTTTATCGCTTTGCATGCTCTTAATGCTTTGATTTTATTGGGATAAATAAATTGGCACAGCCTTTGCTGAATAGCTCGCAACAGTGACCAC ATCGCCTCAGCGGCAAAGGTTCAGAATATGAGCATCAACTTCGGCAAAGCACTCGGCATCCATGAACAGGCCCTAGGTTTCCGCGCCCAGCGCGCAGAGG TGCTGTCCAATAACATCGCCAACGCCGATACGCCGAACTACAAGGCGCGCGACCTGGACTTCGCCAGCGTGCTGGCCGAGCAGAATAGTCGCATGCAGCG
Amino Acid Sequence
>chemotaxis protein CheR
MSSGNLDFEQFRTFLEKACGILLGSNKQYLVSSRLNKLMEQNGIKTLGELVQRMQSQPRGGLREQVVDAMTTNETLWFRDTYPFEVLKNRVLPELIKAYP AQRLRIWSAACSSGQEPYSLSMSIDEFERSNLGQLKAGVQIVATDLSPSMLANCKSGEYDSLAMGRGLSQERLQRYFDPKGPGRWQVKAPVKSRVEFRPL NLLDSYAALGKFDIVFCRNVLIYFSAEVKKDILTRIHATLKPGGYLFLGASEALNGLPDKYQMVQCSPGIIYKAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site