Pseudomonas mendocina NBRC 14162, PME1_RS11555 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTCTCTCGTCTACCAGCCAACGCTGGGAAGGCGATGAGTTTCTGACGACCAGAGCCCGGGAAAACATAGAAAAGATGATGAAAGCCCTCGAACAGAAT CCCGACATGCGCATAGAGGAGATCGAGGCAAGAGCAAAAATGGATAAACCCGGTGATTTCTTTCTGATGCGAGGCTCCAGCTACTCGCCCACAGGCCCCG ACGATCCAAATATCCACCCGCACAGGTAGCCCTTTACTGAAAAGACGGGTGTAGTATCCGCACGGCCGCGCGCCACCACCTCGGTCACGCCTTCCATTGC AGGAAAACCGTGAACCGGAACGCCACGACGTCAATCCCGGGGGCATGCTCACTGGCAGACGCCGCCTGCACGTTCGCTCCATGGAACCACTCGGCGGAGT GCCCGCTCACATCAACGACTACGCCGAAACCAATACCGCCATCGTCAAGAAGACCTCGGTTCCCCGCCGACTGCCCCCGATGAACTGACAAGGAACGATC
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| DNA Sequence for Gene |
>PME1_RS11555
|ampC
ATGCGCTCATCCCTACGCCCGCTGCTCGTCACGCTCGGCCTGTGCCTCAGCAGTCAGGCGGCTTTCGCCGAACTGAACCAGGCAGTCGATGCTGCCGTGA AACCGATGATGCACGCCTACGCCATCCCCGGCATGGCCATTGCCATCAGCCACAAGGGGCAGTCGCATTTCTTCGAGTACGGCGTCGCATCCCGCGAAAG CGGCAGGGCCGTGGATCGCCACACCCTGTTCGAGCTGGGTTCGATCAGCAAACTGTTCACCGCCACCCTCGGCGCCTACGCCGAAGCCCGCGGCACGCTG AACCTCAGCGACAACACCAGCCAGTACCTGCCAGCCCTGCGCGGCAGCGCCTTCGACCACATCAGCCTGCTGGATCTGGCCACCTACACAGCGGGCGGCC TACCGCTGCAGTTCCCAGATGCAGTCAGCAATGAACAGCAGATGCTCGATTACTACCGCAACTGGCAGGCGGTCTACCCACCAGGTACGCAGCGCCTGTA CTCCAACCCCAGCATCGGCCTGTTCGGTCACCTGGCAGCTGCCAGCCTGGCCGAGCCGTTTCAGCAGCTGGTGGAAAAGGATCTGCTGCCGCAACTGGGC ATGCAGGAAAGCTACATCCGCATACCGTCCGAACAGATGAAGCGTTACGCCTGGGGCTACCGCGACAACAAGGCTGTGCGGGTAAACCCCGGCGCACTGG ACGCCGAGGCTTACGGCTTGAAGTCCACGGCCGCCGACATGCTGCGTTTCATCGACGCCAACCTGCATCCGGAGCGGCTGCCTGCACCGCTGCGCCAGGC TATCAGCGCCACACATCGTGGCTACTATCAGGTCGGCGATATGACTCAGGCGCTGGGCTGGGAGCGCTACGCCTATCCCATCAGCCTGGAGAAACTGCAA GCCGGCAACTCAGCGGAAATGGCGCTGCAACCCCAGACAGTGGAGCGCTTCAGCGTACCTAAACCAGCCGATGGCGACCTGCTGCTGAACAAGACGGGTT CGACCAATGGCTTCGGCGCCTACATCCTGCTGCTACCGGCGCGTGAAACCGGCCTGGTGATACTCGCCAACCGCAACTACCCCAATGCCGAGCGCGTACG CCTGGCGCTGCAGCTGCTCGAGGCCATCAAGCCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTAATCCTGGCAGGGGGCGTGAACGGTGCCCCCTACCCTCGCCAACTTCGTCAGGCAGAGAAACCACCGTCGATGGTCAGGTTGGCCCCCGTGATATAC GCTGCCTCGGGGCCGGCCAAATAGGCGACGAAACTGGCAATCTCCTCGGCCTTGCCATAGCGCGGCAGGGCCATGGTCTGCTTCAGCGACTCGGCGAAAT CACCCTGATCCGGGTTCATGTCGGTATCCACCGGGCCCGGCTGCACGTTGTTGACGGTGATCCCGCGCGGCCCCAGGTCACGCGCCAGGCCCTTGGTGAA CCCGGCCACTGCAGCCTTGCTCAGCGCATAGACCGAACCACCGGCGAACGGCATACGCTCGGCGTTGGTGCTGCCGATGGTGATGATGCGCCCCCCTCAC TCATCCGCCGCGCTGCCTCCTGACTGGCGATCACCACGCTGCGCACGTTGACGTCCAGGGTGCGATCCAGGTCCTCGATGCTGAACTCATCGATCGGCGC
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| Amino Acid Sequence |
>class C beta-lactamase
MRSSLRPLLVTLGLCLSSQAAFAELNQAVDAAVKPMMHAYAIPGMAIAISHKGQSHFFEYGVASRESGRAVDRHTLFELGSISKLFTATLGAYAEARGTL NLSDNTSQYLPALRGSAFDHISLLDLATYTAGGLPLQFPDAVSNEQQMLDYYRNWQAVYPPGTQRLYSNPSIGLFGHLAAASLAEPFQQLVEKDLLPQLG MQESYIRIPSEQMKRYAWGYRDNKAVRVNPGALDAEAYGLKSTAADMLRFIDANLHPERLPAPLRQAISATHRGYYQVGDMTQALGWERYAYPISLEKLQ AGNSAEMALQPQTVERFSVPKPADGDLLLNKTGSTNGFGAYILLLPARETGLVILANRNYPNAERVRLALQLLEAIKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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