Pseudomonas mendocina NBRC 14162, PME1_RS11700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTCCTGGGCAATGTCGGCGGCTCGTTCGCGATCACCCAGGCGACGACGTAACCAGCCTTTCAGCCAGCCATGGTGATTGTCGTAGAGCCTTTGAATAT CACCATGCAGCGATGAGGACGGCAAAGCGCTGGACACCCTGAGAGCTCCCATTATCTTGAATGCAGATAAGAATTAGTTGCGATTATAGAGCTCAAACCA GCTTTTTGAAAACTGTCCGCAATGGTGACTCGTCGACCTTAAGAGTTCCTCTGCTGCCTTCCGTGATGAGGGCATTGGCCTGCTCTCAGGTCCTGCTTGC TGAACCAGGAGTAGATGCCCCGATGTGTCACCAGATCTGGATCGTGGTGTTGCTAAGTGTGCTCCGCTCCTTGCAGTGAATAAAAATTTCTTCCATCTGC ACCTGTAGGTTTTTCCCATCTCATTCGTCTACACAGGAGAACGCGCTATTTGCGCCTCATGCACCTTTGCCATCGCATGGCATCTACTCCTGGTTTACCG
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| DNA Sequence for Gene |
>PME1_RS11700
ATGTCCAAGAAGTCCCGTTCCAGAATCTGGTTTCTCGTCCATAGCTGGTTAGCCATGCCGGTCTGGTTTTTTCTTCTGATCGTATGCGTGACCGGTACTC TGGCGACGATCAGCCAGGAAATCGTTTGGCTGGCCAATCCGGATGTTCGTGCCAGCAAGCCTGCGGACAATGCCGAGCGTCTTTCCTTCGCTCGGATACT GGAGGAGATCAATCGCGTAGAACCGGAAACCATCGTTCAGTCGATCAGTCGGCCACAGGAGGATCATTTTGCACTGACTGTAAGGGCCAGCTACCCGGAT GGCACCTCGCCGACGCTCTACGTGAATCCCTACACCGGTGCCATCCAGGGCGTCAGCCCGCAGTTTGATTTCCGTCAGTTCACCCGTGCTCTGCATGGTT GGTGGCTGGTGCCGTTCACAAATGGCTTCAGCTGGGGCTGGTATCTGGTATCCCTGATGGGCCTGCCAATGCTTGCTTCGCTGATCACTGGTCTGGTGGT TTACAAGAAGTTCTGGAGAGGTTTCTTAAAGCCGACCCTGCGCTTCAATCAGGGGGCGCGCATCTTCTGGGGGGATTTCCATCGACTATCGGGTATCTGG TCGATCTGGTTCATCGCCGTCATCTCCGTCACCGGCGTGTGGTTTCTGATCCAGGCGCTGCTTTTCGATAACCACATCTCCATCTCCACCGAAGGCATAC CGCCAGTGGTGGCACGCGACGAGGTCCCTCTGGCCGAGCCGGGCGTCAGTGTGCTGCGTATCGATATCGATAAGGCCATCGAGATAGCCAGCGCCAGTAT TCCAGGCTTGGAGGCCAGCTTCGTTGGCTTGCCGGATAATGCATACAGTCATATTTCCGTCTGGGGGCGCGGCTGGTATCCCTTGATGTTTCAGGGCGCT TCGGTCAATCCCTATAACGGCAATGTCGATCAAGCCCGACTGCTGTCGGATCGTTCCGCTCTGGAGTTCGTCACCGAGTCGATGCGCCCCCTGCATACCG GTGACTTCGGTGGGCTATGGCTCAAGCTGGTGTGGTTCGTCTTCGGTTTGCTTCTGAGCATGATGGTCCTCAGCGGCCTGCTGATCTGGAGCAAACGCAC TGTTCAAGCCACCGCCGCCCTGGCAAAGCGCAGACCCCGCGCGGTGCGTGAGCCCAAACCAGCACCGATTCTCCTCGATGACGTCATGGAGGGGCAGCCA TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGGTCGCGGCCATGCCATCCACCACGTTGGGTCGTTTCTGGCGCAAATGGCGATTTCATCTGAACATCCTTCTGGTGATCATCCCGCTGGCCTTCAT GCCCAAGTATTTCCACCAGGTCGCGTTGTTTCGTGGCGATAGCGGCCTGGGTGAGCGGGAGGTGGGCGAGGTGCAGGTCGGCCCCTGGAGCCTGCGCCTG GCCGAGCTTTTCGAAGAACCACCGCGCCTGGAAGGGCCTGCCGGATACATGAAGAGTTTCAACGCGGCGTTGTGTGCGGCCTGCCTAGACGAGGTCAAGG CCACCTACCTGCGTATCGGCAAGCCGCGCAGCCTGCGTGCCGCCGGCGCGATCTTCTTCGGTAGCCCCTATCGGATGGGCGCCAGCGTACCGATCCCAGC GCGTACCAAGGCCGACGCCGAACTCTGGATCACCATGGAGGGCTGGGACGGCTCTATGCATCAGGCGTCCATCCCGCTCGCTCAGGCATCACCTGCCACC
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| Amino Acid Sequence |
>peptidase
MSKKSRSRIWFLVHSWLAMPVWFFLLIVCVTGTLATISQEIVWLANPDVRASKPADNAERLSFARILEEINRVEPETIVQSISRPQEDHFALTVRASYPD GTSPTLYVNPYTGAIQGVSPQFDFRQFTRALHGWWLVPFTNGFSWGWYLVSLMGLPMLASLITGLVVYKKFWRGFLKPTLRFNQGARIFWGDFHRLSGIW SIWFIAVISVTGVWFLIQALLFDNHISISTEGIPPVVARDEVPLAEPGVSVLRIDIDKAIEIASASIPGLEASFVGLPDNAYSHISVWGRGWYPLMFQGA SVNPYNGNVDQARLLSDRSALEFVTESMRPLHTGDFGGLWLKLVWFVFGLLLSMMVLSGLLIWSKRTVQATAALAKRRPRAVREPKPAPILLDDVMEGQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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