Pseudomonas mendocina NBRC 14162, PME1_RS15850 (mdoG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACCTGCATGACGAGGCCGCTTCGGTGATCCGTCCGGTGAAGGAACTCAAGGATTTTCAGAGGGTCAAGCTTGAAGCAGGTGAGACGCGTGAGCTGAGTT TTGAGATCGACGAAGCCATGCTGCGTTTCTATAACGCCAGCCTGCAGCAAGTTAGCGAGCCAGGTGCCTTCCGTGTCCAGCTGGGGCTGGATTCGGAGAG CGTGCAGGAGGCGCGTTTCGAACTGTTGCCACGCCAATGAGGGTGTGGCCCAAGGAGGCGAAAAATATACTCGCGCGAGCACCTGTGCCGGACTTCACGA TCTGGTAATAATGCGCAGAAAGAATCCGCGCATGCGGAGACGTCGCCGTTCGGTTGGCGGTCTGCATTGTGCTCGCGTTGCCTTTGTACCATTCGCCTGA TTTCAACTTTCTGCAGCGGCCGCCCGTGGGCTTGTCGCTGCCTGTCAGTACGTGTTGCCCTGGAGGCTGTGTGTCGATGAGTCGTTGTTCTGGAGCCCGT
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| DNA Sequence for Gene |
>PME1_RS15850
|mdoG
ATGGGCAAGGCCGGCAAGCTGGCCCTCTGTGTGCTCCCTCTGCTGTTCGCTGCCCAGAGCTGGGCCTTCGAGCTGGATGATGTGGCCGTCAAGGCCAAGG AGCTTGCTGCCGAACGCTACAGTGCCCCGCAAAGCCGTTTGCCGGCTTCGCTGCGCGAACTGCCGTTCGCCGGCTACCAGAAGGTTCGCTTCCTTGAGGA GAAAGCGCATTGGCGCGACGGCAAGACGCCGTTCCAGCTGTATTTCTTCCACCAGGGCATGCATTTCGATGTACCGGTGAAAATCAACGAAGTGACTGCC GAAGGCACCCAGGAGATCAAGTACGACCCGTCGATGTTCGATTTCGGCGACCTCAACCTGAACCCCGATGACCTCAAGGACCTCGGCTTCGCCGGCTTCA AGGTGATCAACGAGATCAACGCCAATGGCCGGCACGACGAAGTGATGAGCGTGCTCGGTGCCAGCTACTTCCGTATCGTTGGCAAGGGCCAGGTGTTTGG CCTCTCAGCTCGCGGTCTGGCGATTGACACGGCACTGCCGTCCGGTGAGGAGTTCCCGCGTTTCACCGAGTTCTGGATCGAGAAGCCGCAACCGGATCGC CGTAGCCTGGTGATCTACGCACTGCTCGACTCGCCGCGCGCCACCGGTGCCTATCGCATGGAAATCAAGCCGGGCCGCGACAGCGTGCTCGACGTGCAGT CCAAGGTCTACCTGCGCGAGAACGTCGAGAAGCTCGGCATCGCTCCGCTGACCAGCATGTACCTGTTCGGTGCCAACCAGCCGTGGCCGCGCCCGAACTA CCGCCCGCAACTGCACGACTCCGATGGCCTGGCCATCGCCGCCGGCAATGGCGAGTGGATCTGGCGTCCGCTGAACAACCCGCAGCGCCTAAACGTCAGC AGTTACCGCATCGACAACCCGCGCGGCTTCGGTTTGATGCAGCGCGGTCGCGACTTCAACCAGTATCAGGATCTCGACGACCGCTACGAGCTGCGTCCCA GTGGTTGGGTGGAGACCGTCGGTGACTGGGGGGCTGGTCATGTCGAGCTGGTGGAGATTCCGACCCCGGACGAAACCAACGACAACATCGTTGCCCTGTG GCGCCCGGAGAAGCTGCCGGCGCAGGGGGAGTCGCTGGATGTGGCCTATCGCCTACACTTCAGCCGTGACGATGCCAAGCTGCATGATCCGCAACTGGCG ATGGTCAGCCAGACCCGTCTGTCCGAGGGCGACATCAAGCAGGCCAACCTGATTCGTCAGGCCGATGGCAGCACCGCGCTGGTGGTCGACTTCGTCGGTG AGGAACTGGCCAAGCGTTCGCCCGATGCCGCGCCGCAGGTGCAGGTCAGCGTCGATGACAACGCCGAGTTGCTGGAAGACAGCCTGCGGTATAACCCGGT GAGCAAGGGCTGGCGCCTGATGCTGCGGGTCAAGGTGAAGAACCCGGCGCAGCCGGTGGAGATGCGTGCCGCGCTGGTCGAGGACGGCAAGCCTGTGTCG GAAACCTGGAGCTATCAGCTGCCTTCCCATGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCCTAGACGCTACACAGATCCAGGATTACCTGGGCGAACTGCCGCTCGATCACGAGCGGCAGCAGGCTTTGGCCAGCCGAGTCGAAGAGGAGGGCGGC GATCTTGCGACACTGCATCGCGCCCTGCACGAGGACGATCAGGTCACCGCCGAGCCCCAGGAAGAAACCCGCGAGATGCTCGAGTCAGTGCCAGCGCGGC TGGCGCTGGGCTGGCCGGATGCGCTAGAGCGCGGCTGCCGCATCGTGCAGGATCATCAGGGGCGTCCGACCATCGATTCGACCCCGCCGATCAAGCGCAC GCGCATGGTGCCGGAACCCTGGCAGACCAATATCCTGCAGCGCGGTTGGCGCCGCCTGAAGGGCGAGAAGCCCGCGCCGCGACCACGCACGCGCGAAAGC GAGGACTTCGCCGAAGCACGCTGGCGTCATGTCGCTGCGGTACGCCGCGCCGCGCTGCTGGTACTGATGATCGTGCAGACCGTGGTTGCCACCTGGTACA
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| Amino Acid Sequence |
>glucan biosynthesis protein G
MGKAGKLALCVLPLLFAAQSWAFELDDVAVKAKELAAERYSAPQSRLPASLRELPFAGYQKVRFLEEKAHWRDGKTPFQLYFFHQGMHFDVPVKINEVTA EGTQEIKYDPSMFDFGDLNLNPDDLKDLGFAGFKVINEINANGRHDEVMSVLGASYFRIVGKGQVFGLSARGLAIDTALPSGEEFPRFTEFWIEKPQPDR RSLVIYALLDSPRATGAYRMEIKPGRDSVLDVQSKVYLRENVEKLGIAPLTSMYLFGANQPWPRPNYRPQLHDSDGLAIAAGNGEWIWRPLNNPQRLNVS SYRIDNPRGFGLMQRGRDFNQYQDLDDRYELRPSGWVETVGDWGAGHVELVEIPTPDETNDNIVALWRPEKLPAQGESLDVAYRLHFSRDDAKLHDPQLA MVSQTRLSEGDIKQANLIRQADGSTALVVDFVGEELAKRSPDAAPQVQVSVDDNAELLEDSLRYNPVSKGWRLMLRVKVKNPAQPVEMRAALVEDGKPVS ETWSYQLPSHE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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