Pseudomonas mendocina NBRC 14162, PME1_RS21330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCATGCCCACAAAAGAAAAAGCCAAAAGCACCAGCCAGCTGATTCGTGGTTTCGAGCCTTATCCGGAAAAGAAAGGCGAGGAATACATGAGCGAGCCGA TGCGCGCTCACTTCACCAGCATCCTCAATAAGTGGAAGCTGGAGCTGATGCAGGAAGTCGACCGTACCGTGCACCACATGCAGGACGAAGCGGCCAACTT CCCCGACCCGGCCGACCGCGCCAGCCAGGAAGAAGAATTCAGCCTGGAACTGCGTGCCCGTGATCGCGAGCGCAAACTGATCAAGAAGATCGACGAAACC CTGCAGCTGATCGAAGACAACGATTACGGCTGGTGCGATTCCTGCGGTGTCGAGATCGGCATCCGCCGCCTCGAAGCCCGCCCGACCGCGACCCTTTGCA TCGATTGCAAGACGCTGGCGGAAATCAAGGAAAAGCAGATCGGTTCCTGATCTGACGACGGGGCGCTTAGGCGCCCCGCTCTGTTTCTGGCCTTCGCTTC
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| DNA Sequence for Gene |
>PME1_RS21330
ATGAACACAGCCTATATCGGGCGTTTCGCCCCTACGCCCAGCGGTTACCTGCACTTTGGCTCGCTGGTCGCCGCCCTCGCCTCCTATCTCGATGCCCGCG CCGTCGGCGGCCGTTGGCTGCTGCGCATGGAAGATCTCGATCCGCCCCGGGAAGTACCCGGCGCACAGGATGCGATTCTGCGTACCCTGGAGTGCTACGG TTTCGAGTGGGACGGCGAACTGGTACGCCAAAGTGAGCGCCACGCCGAATACGCCGCGGTCATCGCCCGCCTGTTCAGCCAGGGCCTGGCCTACGCCTGC ATCTGCTCACGCAAGCAGCTCGAAGGTTACGCCGGGATCTACCCCGGATTCTGCCGCAACGCCTGCCACCCTGATCACGACGCGGCCATCCGCCTGCGCG TGCCGGAGCTGGACTATCACTTCGTCGACCGGGTGCAGGGGGAGTTTCGCCAGCACTTGGGCCGTGAAGTGGGCGACTTCGTGATTCGTCGTCGCGACGG CCTGTTCGCCTATCAGCTCGCCGTGGTGCTGGACGATGCCTGGCAGGGCGTAACCGACGTGGTACGCGGCGCCGACCTGCTCGACTCCACCCCGCGCCAG CTGTATCTGCAGGAACTGCTGGGGCTGTCACAACCACGTTACCTGCACGTGCCGCTGATCATCCAGCCGGACGGGCACAAGCTGGGCAAGAGCTACCGCT CGCCACCCCTGCCCGCTGACCAGGCCGGGCCGCTGCTGCTGCGCGCACTGCGCGCGCTGGGGCAACAGCCGCCGGCCGACCTGCAGGGCGCCACGCCGGG CGAGCTACTGGCCTGGGGCGTCGCCAACTGGGACGCCACGCGCATTCCACGAAGCCGTACCCTGGCAGAAGCGCAACTGAGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGCGCACAGCGACTCCTACGGCAAGCCTCAAGTTTGTGGCTTGAAGCGCGCGGCATCCTTTACCATCGCGGCATCTTTCGACGAGATGTCACATGTAT ATCTACCGACTGGTTCTGATCCTGGTAGTGGGAATCTACCTGTTCTCACCGGCCATCATGGACTGGTGGATCGACCCCAATGGCGCCTGGTACCGGCCTT ATCTGCTGTGGCTGATCCTGATCGTCGTCACCTTCATTCTTCAGAGCCAACGCGATGCTGACGAGCTTTAGCCTGAGCGAACTGATCCTGATCAGCGCCG GCTATCTGCTGATGCTGTTCGGTGTCGCCTGGGTCAGTGAAAAAGGGCTGATTCCGCGCTGGATCATCCGCCACCCGCTGACCTACACCCTGTCGCTGGG CGTATACGCCAGCGCCTGGGCCTTCTACGGCACGGTCGGCCTGGCCTACCAGTACGGTTACGGCTTTCTCGCCAGCTACCTCGGGGTTTCCGGGGCCTTT
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MNTAYIGRFAPTPSGYLHFGSLVAALASYLDARAVGGRWLLRMEDLDPPREVPGAQDAILRTLECYGFEWDGELVRQSERHAEYAAVIARLFSQGLAYAC ICSRKQLEGYAGIYPGFCRNACHPDHDAAIRLRVPELDYHFVDRVQGEFRQHLGREVGDFVIRRRDGLFAYQLAVVLDDAWQGVTDVVRGADLLDSTPRQ LYLQELLGLSQPRYLHVPLIIQPDGHKLGKSYRSPPLPADQAGPLLLRALRALGQQPPADLQGATPGELLAWGVANWDATRIPRSRTLAEAQLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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