Pseudomonas mendocina NBRC 14162, PME1_RS21145 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAGTGAAGTGCTGGCCCTGAATCCTGATGGTGTGTTCCTCTCCAATGGCCCTGGCGATCCCGAGCCCTGCGACTACGCGATCAAGGCGATCAAGGAAAT CCTGGAAACCGATATCCCGGTATTCGGTATCTGCCTCGGTCACCAACTGCTGGCGCTGGCCTCCGGCGCCAAGACCCTGAAAATGGGTCACGGCCACCAC GGTGCCAACCACCCGGTACAGGATCTCGACACGGGCGTGGTGATGATCACCAGCCAGAACCACGGTTTCGCCGTGGACGAGAACAGCCTGCCGAGCAATC TGCGCCCGATCCACAAGTCGCTGTTCGATGGCACCCTGCAGGGCATCGAGCGTACCGACAAGGACGCCTTCAGCTTCCAGGGGCACCCTGAGGCGAGCCC CGGCCCGCACGATGTGGCTCCGCTGTTCGACCGCTTCATCGAAGCCATGGCCAAGCGCCGCTAAGCCCGCCGACTGACCCAAGGATTCGAGAGAGATAAA
DNA Sequence for Gene
>PME1_RS21145 |carB
ATGCCAAAACGTACAGATATCAAAAGCATCCTGATCCTCGGTGCCGGCCCCATCGTCATTGGCCAGGCCTGTGAGTTCGACTACTCCGGCGCTCAGGCCT GCAAGGCGCTGAAGGAAGAAGGGTTCCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGGCTACCGTGGCCAAGATCATCGAGAAGGAGCGCCCGGACGCGCTGCTGCCGACCATGGGCGGCCAGACCGCGCTGAACTGCGCCCTG GATCTGGAGCGCCATGGCGTGCTGGAGAAGTTCGGTGTCGAGATGATCGGTGCCAACGCCGACACCATCGACAAGGCCGAAGATCGCTCGCGCTTCGACA AGGCGATGAAGGACATCGGCCTGGCCTGCCCGCGTTCGGGCATCGCCCACAGCATGGAAGAAGCCTACGGCGTGCTGGAGATGGTGGGTTTCCCCTGCAT CATCCGCCCCAGCTTCACCATGGGCGGCACCGGCGGCGGCATCGCCTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGGCTGGATCTGTCGCCG ACCAACGAGCTGCTGATCGACGAATCGCTGATCGGCTGGAAGGAATACGAGATGGAGGTGGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAGAACTTCGATCCGATGGGCGTGCACACCGGTGACTCGATTACCGTTGCTCCAGCGCAGACTCTGACCGACAAGGAATACCAGATCCTGCGCAACGC CTCGCTGGCGGTGCTGCGTGAGATCGGCGTGGAAACCGGTGGCTCCAACGTGCAGTTCGGCATCTGCCCGAACACCGGGCGCATGGTGGTGATCGAGATG AACCCGCGCGTGTCGCGTTCCTCGGCGCTGGCCTCCAAGGCCACCGGCTTCCCGATCGCCAAGATCGCCGCCAAGCTGGCCGTCGGTTACACCCTCGACG AGCTGTCCAATGACATCACCGGCGGTCGTACCCCGGCGTCGTTCGAGCCGGCTATCGACTACGTGGTGACCAAGGTTCCGCGCTTCGCCTTCGAGAAATT CCCCAAGGCCGACGCCCGTCTGACCACCCAGATGAAATCCGTGGGTGAAGTCATGGCCATCGGTCGTACCTTCCAGGAGTCGGTGCAGAAAGCCCTGCGC GGCCTGGAAGTCGGCGTTGCCGGCTTCGATCCGAAGCTCGACCTGAACGACCCGGAAGCTGAAAGCACCCTGCGTCGCGAGCTGACCGTGCCCAGCGCTG ACCGTATCTGGTACGTGGCCGATGCTTTCCGCGCCGGCAAGACCGTGGCCGAAGTGTTCGAACTGACCCGTATCGACGAGTGGTTCCTGGTGCAGATCGA GGATCTGATCAAGGACGAAGCCACCGTGCAGACCCTGGGTCTGTCCGCCATCGACTACGACCTGATGTTCAAGCTCAAGCGCAAGGGCTTCTCCGATGCG CGTCTGGCCAAGCTGCTGGGCGTTTCCGAGAAGAGTTTGCGCGCGCACCGCCACAAGCTGAAAGTGCTGCCGGTGTACAAGCGCGTCGACACCTGCGCTG CCGAATTCGCCACCGACACCGCCTATATGTACTCGACCTACGAGGAGGAGTGCGAGGCCAACCCGAGCGGTCGCGACAAGATCATGATCCTCGGTGGCGG CCCGAACCGTATCGGTCAGGGCATCGAGTTCGACTACTGCTGCGTACACGCCGCGCTGGCCATGCGTGAAGACGGTTTCGAGACCATCATGGTCAACTGC AATCCGGAAACCGTCTCCACCGACTACGACACCTCCGATCGCCTGTACTTCGAGCCGGTGACCCTGGAAGACGTGCTGGAAATCGTCCGCGTCGAGCAGC CCAAAGGCGTGATCGTGCAGTACGGCGGCCAGACCCCGCTGAAGATCTGCCGTGCCCTGGAAGAAGCCGGCGTGCCGATCATCGGCACCAGTCCCGAGGC CATCGACCGCGCCGAAGACCGCGAGCGCTTCCAGCAGATGGTGCAGCGCCTGAACCTGCGTCAGCCGGCCAACGCCACTGCGCGCAGCGAGGATGAAGCC CTGGCTCTGTCGAAGAACATCGGTTACCCGATGGTGGTGCGTCCGTCCTACGTGCTGGGTGGCCGGGCGATGGAAATCGTCTACCAGGAAGAAGAGCTCA AGCGCTACATGCGTGAAGCGGTGAAGGTCTCCAACGACAGCCCGGTGCTGCTCGATCGCTTCCTCAACTGCGCCATCGAGGTGGACGTGGATGCAGTGTG CGACGGCGAGACCGTGGTGATCGGTGCGATCATGCAGCACATCGAGCAGGCTGGCGTGCACTCCGGTGACTCCGCTTGCTCGTTGCCGCCGTACTCGCTG CCGATGCACATCCAGGACGAGATCCGCGAGCAGGTCAAGAAAATGGCCCTGGAGCTCGGCGTGGTCGGCCTGATGAACGTGCAGATGGCGGTGCAGGGCG AGGACATCTATGTCATCGAAGTGAACCCGCGCGCCTCGCGTACCGTGCCGTTCGTCTCCAAGTGCGTTGGCGAATCGCTGGCCAAGGTGGCTGCTCGCGT CATGGCCGGCAAGAGCCTGGCCGAAGCCGGTTACAGCGAGGAAATCATCCCGCCGTTCTTCAGCGTCAAGGAGGCGGTGTTCCCCTTCGCCAAGTTCCCG GGTGTCGACCCGATCCTCGGCCCGGAGATGAAATCCACCGGTGAAGTCATGGGTGTCGGTGACACCTTCGGTGAAGCCTTCGCCAAGGCCCAGCTGGGTG CCAGCGAGATCCTGCCGAACTCCGGTTGTGCGTTCATCAGCGTGCGTGAAGACGACAAGCCGGAAGCCGTTCAGGTCGCGCGCGATCTGGTCAGCCTGGG CTTCGAGGTCGTCGCCACTGCCGGTACCGCCAAGGTGATCGAGGCTGCCGGTCTGCCGGTACGCCGCGTGAACAAGGTGACCGAAGGTCGTCCGCACGTG GTCGATATGATCAAGAACGACGAAGTCACCCTGATCATCAACACCACCGAGGGGCGTCAATCCATCGCTGACTCCTACTCCATTCGTCGTAACGCCCTGC AGCACAAGATCTACTGCACCACCACCATCGCGGCTGGTCAGGCGGTCTGTGAGGCGCTCAAGTTTGGTCCCGAGAAGACCGTGCGCCGGCTGCAGGATCT GCATGCAGGAATCAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAAGTACCCCATGACCGTCCAGGGCGCTCGCGCCCTGGAAGAAGAGCTGGCGCACCTGACCAAGGTGCGTCGTCCCGCACTGAGCCAGGCGATTGCCGA GGCTCGTGAACTGGGCGACCTCAAGGAGAACGCCGAATACCATGCCGCCCGCGAAGAGCAGGGCATGGTCGAGGCGCGTGTGCGTGATATCGAAGGCCGC CTGCAGAATGCGGTGATCATCGATGTCACCAGCATCGAGCACACCGGCAAGGTGATCTTCGGCACCACGGTGGAAATCGCCAACGTCGAGACTGACGAAA GCGTGACCTACCAGATCGTTGGCGAAGATGAAGCCGACATCAAGCAGGGCAAGATTTCCGTCGGTTCGCCCATCGCTCGCGCCCTGGTGGGCAAGAGCGA GGGTGACGTGGTCGGCGTGCAGACTCCCAGTGGCCTGGTCGAGTACGAGATTGTCGAAGTCCGCCACATCTAAGCCGCACCAGCCGTCGCGGGCCGCTGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAMADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEMVGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELSNDITGGRTPASFEPAIDYVVTKVPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALR GLEVGVAGFDPKLDLNDPEAESTLRRELTVPSADRIWYVADAFRAGKTVAEVFELTRIDEWFLVQIEDLIKDEATVQTLGLSAIDYDLMFKLKRKGFSDA RLAKLLGVSEKSLRAHRHKLKVLPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGFETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKICRALEEAGVPIIGTSPEAIDRAEDRERFQQMVQRLNLRQPANATARSEDEA LALSKNIGYPMVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDRFLNCAIEVDVDAVCDGETVVIGAIMQHIEQAGVHSGDSACSLPPYSL PMHIQDEIREQVKKMALELGVVGLMNVQMAVQGEDIYVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKSLAEAGYSEEIIPPFFSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQLGASEILPNSGCAFISVREDDKPEAVQVARDLVSLGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGQAVCEALKFGPEKTVRRLQDLHAGIKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site