Strain | Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGTACTCGCGGCGGCGCGTCATGTCGGTGTGGTGCCGGCGCTGGGTATCGAGGCGCTGGGCCAGTTCATCAACGCCAAGCGGCGTATGGAAAAGGTCGC CGAGGTGAACGGTGTGACCATTTTCGATGACTTCGCCCACCACCCCACGGCCATCGCCACCACGCTCGATGGCCTGCGCAAGCGTGTCGGCGACGATACC CAAGTGATCGCCGTGATCGAACCGCGCTCCAATTCCATGAAGCTCGGCGCCCATCGTGACGGCCTGGCCGAATCCGCCGAGCACGCCGATGTGGTGTTCT GGTATGCGCCGCCGAATCTTGGCTGGGACCTGGCCGCCACCGTGGCGCAGGCGCGTAATCCGACGCGGGTATGCGACTCGCTGGAGTCGATCATCGACGG CGTGAAGGCCCTGGCGCGCCCCGGCACCCAGGTGGTAATCATGAGCAACGGCGGCTTCGGCGGCCTGCATGGCAAGCTGGCAGCAGCGCTGGAGGGATAA
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DNA Sequence for Gene |
>PME1_RS20135
ATGTCTGGTCCGGAACGCATCACCCTGGCCATGACCGGCGCCTCGGGCGCGCAATATGGCCTGCGCCTGCTCGACTGTCTGGTGCAGGAGGAGCGTGAAG TGCACTTCCTGATTTCCAAGGCCGCGCAACTGGTGATGGCCACCGAGACCGACGTGGCGTTGCCGGCCAAGCCGCAGTCCATGGCGCAGTTCCTCACCGA ATACACCGGCGCGGCGCCAGGGCAGATCCGCGTCTATGGCAAGGAAGACTGGATGGCCCCGGCCGCCTCCGGCTCCGGCGCGCCAACGGCCATGGTGATA GTGCCGTGCAGCACCGGCACCTTGTCGGCGATCGCTGCGGGGGCCTGTAACAATCTGATCGAGCGCGCCGCCGACGTGGCGCTCAAGGAGCGTCGCCAGC TGATTCTGGTGCCGCGTGAGGCGCCGTATTCGAGCATCCATCTGGAGAACATGCTCAAGCTGTCGAATCTGGGTGTGACCATTCTGCCGGCTTCACCCGG CTTCTATCATCAGCCGCAGACGCTGGATGATCTGGTGGATTTCGTGGTTGCGCGTATCCTCAACTGCCTGGGCGTACCCCAGGACATGCTCCCCCGCTGG GGCGAGCATCATATGGTGTCGGACGAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGATCAATGTCCATGGCCAATCGTTACCTGTTGGGCTGCCTGTTGGCCCTTTCCATGATGCCTGCTGCGCAGGCTTCGATGCGCTGCGGCACTACCCT GATAAACGAGGGCGATCTGACGGTGGATGTCCGACGCAAATGCGGCGAGCCTGACCACCGCGAGGTGATCCCACCCAGCAGTCCGCAAGGTGGCGGGGTA ACCGTGGAGCAGTGGGTCTACGGGCCAAGCAACGGCATGTATCGTTACCTGCGCTTTCTCGACGGCAAGTTGGTCGAAATCCGGGTCACGCGCGGATGAG GCGAGGGCTGGTCGCCGGCCTGGCGCTGCTGAGCCTGAGCGGCTGTGCCACCGTGCGCACCCTGGATGCAGCCAAGCTTGGTGCGCCGGTGGTCTACGCC GGCACACGGCTGGATTGGTACGCGATCAATGGTGGTTGCTGCCCGCTGGACCGTTTCGGCGCCGAAGCACCGAGCTATCCCGGGCTGGATCTGCCGGGCA
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Amino Acid Sequence |
>aromatic acid decarboxylase
MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQSMAQFLTEYTGAAPGQIRVYGKEDWMAPAASGSGAPTAMVI VPCSTGTLSAIAAGACNNLIERAADVALKERRQLILVPREAPYSSIHLENMLKLSNLGVTILPASPGFYHQPQTLDDLVDFVVARILNCLGVPQDMLPRW GEHHMVSDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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