Pseudomonas mendocina NBRC 14162, PME1_RS23460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mendocina NBRC 14162, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGACCATCGGTGATGATGTCGAGATCGGCGCCAACACCACGGTGGATCGCGGCGCGATTTCCGACACCCTGATCGGCAATGGCGTGAAACTGGATAACC AGATCATGATCGCGCACAACGTACAGGTCGGTGACAACACGGCCATGGCCGGTTGCTGCGGGATCTCCGGCAGCACCAAGATCGGCAAGAACTGCATGAT CGCTGGTGGTGTGGGGATGGTCGGTCATATCGAGGTATGCGACAACGTGTTCGTGACCGGCATGACCATGGTGACCCGTTCGATCACCGAGCCGGGCGCC TATTCTTCCGGCACCGCCATGCAGCCGGCCGGCGAATGGAAGAAGAGTGCGGCCCGTATTCGTCAGTTGGACGAGATGGCCAAGCGTCTGCGCGAGCTGG AAAAACAGCTGGCCGCCGTGACCCAGACGGCAAACGTCTCATCTGATGCCTGAGCACGGCGCGACCGTGCTCTTTTCTTTTCTTACAGGCTTAACCGGAC
DNA Sequence for Gene
>PME1_RS23460
ATGATGGACATCAACGAAATTCGTGAATATTTGCCGCACCGCTATCCGTTCCTGCTGGTGGATCGTGTGGTGGACCTGGACGTCGAAGGCAAGACTGTTC GCGCCTACAAGAATGTCAGCATCAACGAGCCGTTCTTCAACGGTCACTTCCCCGAGCATCCGATCATGCCGGGCGTGCTGATCATCGAGGCCATGGCTCA GGCCGCCGGTATCCTCGGTTTCAAGATGATGGGCGTGAAGCCGGCCGATGGCACCCTGTACTATTTTGTCGGTTCCGACAAACTGCGCTTCCGCTCTCCT GTCACTCCCGGCGATCAGCTTGTGCTGGAGGCGAAGTACCTGAGCGATCGTCGCAGCATCTGGAAATTCGAGTGCCGTGCCACTGTCGATGGCAAGGAAG TCTGCTCCGCTGAAATCATCTGTGCGGAACGCAAGCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCGATTGACCCTCGCGCGATCATCGACCCCAGTGCCAGATTGGCCGACGACGTCGTCGTCGGCCCGTGGAGCATTGTCGGGCCCGATGTGGAAATCGG CGAGGGTACAGTCATCGGCCCGCACGTCGTGCTCAAGGGGCCGACCGTGATCGGCAAGCACAATCGCATCTACCAGTTTTCTTCGGTCGGTGAAGACACG CCAGACCTGAAGTACAAGGGCGAGGCTACGCGCCTGGTGATCGGTGATCACAACACGATTCGTGAAGGTGTCACCATTCACCGGGGCACCGTGCAGGATC GCAGTGAAACCACCATTGGTAACCACAACCTGATCATGGCCTATGCCCATATCGGCCATGACAGCGTGATCGGCAATCACTGCATCCTGGTCAACAACAC GGCGCTGGCCGGCCACGTTTGGGTCGACGACTGGGCGATCCTGTCCGGCTATACCCTGGTACATCAGTTCTGCCGCATTGGTGCGCACAGCTTTTCCGGC
Amino Acid Sequence
>3-hydroxyacyl-ACP dehydratase
MMDINEIREYLPHRYPFLLVDRVVDLDVEGKTVRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMMGVKPADGTLYYFVGSDKLRFRSP VTPGDQLVLEAKYLSDRRSIWKFECRATVDGKEVCSAEIICAERKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site