Pseudomonas mediterranea CFBP 5447, N005_RS26250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mediterranea CFBP 5447 scaffold36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTTCCAAGCGTACCGGTCCGGACCTGGCCCGTGTTGGCGGCCGTTACTCCGATGACTGGCACCGTGCGCACTTGTACAACCCGCGCAACGTAGTGCCCG AGTCGAAAATGCCGGCCTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAAGACACCGCGAAAAAAATGGAAGTCCTGCGCACCCTGGGCGTGCCTTA CACCGACGAAGACATCGCCGGTGCCAAGGATGCCGTGAAGGGCAAGACCGAAATGGACGCGCTGGTGGCCTATCTGCAAGGCCTGGGCACCATCATCAAA AGCAAACGGTGATTCTTAATGGATATCGGGATGATTCGCGGCCTGGGCACCGTCGTCGTGATGGTGGCTTTTATCGGTCTGGCCCTGTGGGTGTTCAGCC CCAAGCGCAAGTCGGAGTTTGACGACGCGACCTTGCTGCCGTTCGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
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| DNA Sequence for Gene |
>N005_RS26250
ATGACAACGTTCTGGAGTCTGTACGTCACAGTCCTCAGCCTGGGAACGATCTTCTCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCAGCG AGGCCACCGAAGAGACGGTTGGCCATTCCTTCGACGGGATCGAGGAATACGACAACCCGCTGCCGAAATGGTGGTTCATGCTGTTCGTGGGCACCATCGT GTTCGCCCTCGGCTACCTGGCGCTCTACCCTGGCCTGGGCAACTGGAAAGGCCTGCTGCCAGGCTATAACTACCTGGACACCGAAAAGCAGACCGCTTTC GCCAACGGCCAGACCGGCTGGACCGGCGTGCACGAGTGGGAAAAGGAAATGGCGCGCTCGGATGCCAAGTTCGGTCCGATCTTCGCCAAGTTCGCTTCCA TGCCCATCGAAGAAGTTGCCAAGGATCCGCAAGCCCTGAAGATGGGCGGCCGCCTGTTCGCCTCCAACTGCTCGGTCTGCCACGGTTCCGACGCCAAGGG TGCCTACGGTTTCCCTAACCTGACCGACGCCGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGGGCGGTCGTCACGCGGTGATG CCGGGCTGGGCTGCCGTCGTCGGCGAGCAGGGTGTCGCCGACGTGGCGTCTTACCTGGTGACCAGCCTGCACGGTCGCAAACTGCCGGAAGGCGCCAAGG CCGATCCGGCCAATGGCCAGAAAATCTTCGCTGCCAACTGCGTGGCCTGCCACGGTCCGGCAGGCCAGGGTACTCCAGCCATGGGCGCACCTAACCTGAC GCACCCGGCCGCGTTCATCTACGGTTCGAGCTTCGCTCAACTGCAGCAGACCATCCGCTACGGCCGCCAGGGCCAGATGCCTGCCCAGGCCGACCTGCAA GGCAACGACAAGGTCCACCTGCTGGCCGCCTATGTCTACAGCCTGTCCCACGGCGAAAAGGCTCCGGCCGCTGACGCCCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTTACGCCTGATACACGGAAGGCCCCGTCAATGCACATTGACGGGGCCTTTTTCATGGCCGGTCCGATAGGACGCGCCGTTTCTCTTGCTGCCTACCA GCCAAAGTAGTAACGTGCCTACATCAGCGTTCAATGAGGGCACGCCATGTCCATCACCACCATGTCCAGCCGCGAATTCAACCACGACACAAGTGGTGCC AAAAAAGCCACCCGCGAAGGGCCCGTCATCATCACCGACCGTGGCAAGCCGGCCCATGTGCTGCTAAGCATTGAGGAGTATCAAAAACTGACCGGCATCG GCGCCAGCATTGTCGAGCTGCTGGTCATGCCCGATGCGCCGGATATCGATTTCGACACCGAGCGCGCCGTCATCACTCCTCGAGCGGTAGACCTGTCCTG ATGTATCTACTCGACACCAATGTCATTTCGGAATTGCGCAAACCCCAGGCCGACAGCAACGTGCAGGCCTGGGCCCGCAGCGTGGCTGCGCCCAGTCTGT
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| Amino Acid Sequence |
>cytochrome Cbb3
MTTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRSEATEETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLALYPGLGNWKGLLPGYNYLDTEKQTAF ANGQTGWTGVHEWEKEMARSDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVM PGWAAVVGEQGVADVASYLVTSLHGRKLPEGAKADPANGQKIFAANCVACHGPAGQGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQADLQ GNDKVHLLAAYVYSLSHGEKAPAADAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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