Pseudomonas mediterranea CFBP 5447, N005_RS17920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR33446 | PROTEIN TONB-RELATED | - | - | 20 | 291 | 1.2E-21 |
| Gene3D | G3DSA:3.30.1150.10 | - | - | - | 163 | 289 | 5.3E-16 |
| Coils | Coil | Coil | - | - | 156 | 176 | - |
| SUPERFAMILY | SSF74653 | TolA/TonB C-terminal domain | - | - | 186 | 293 | 8.89E-20 |
| FunFam | G3DSA:3.30.1150.10:FF:000012 | Energy transducer TonB | - | - | 159 | 291 | 5.0E-38 |
| Pfam | PF03544 | Gram-negative bacterial TonB protein C-terminal | IPR037682 | TonB, C-terminal | 212 | 289 | 1.5E-14 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 95 | 160 | - |
| NCBIfam | TIGR01352 | JCVI: TonB family C-terminal domain | IPR006260 | TonB/TolA, C-terminal | 214 | 290 | 2.2E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.