Pseudomonas mediterranea CFBP 5447, N005_RS15020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mediterranea CFBP 5447 scaffold34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGATAGCCGTTGCTGAGTTCCAGTTCGATCTGCACGTTGGGATACGTGCGGGCGAACTCCAGCAACAGTCCCTCGAAGAAGGTTTCGCCCAACGACACC GGCACCGTCATACGCACCGGCCCGGAAATATCATCTTTCAATCGAGCCAGGGCCTGACGCGCCCTTTCCACCTGAACCAACAACGCTTGGGCCTGTGGCA GCAAGGCCGCCCCGGCGGCTGTGAGGCTCAAGCGCCGTGTGGTGCGCTGCAGCAGTACCACTGAAAAGCGACTTTCCAACAGGCTTATGCGCTTGGACAG CTGGCCCTTGCTGCACCCCAATTGTTGGGCCGCCAGGGTAAAACTGCCGGCCTCGATCAACACGGCGAACGCCGCCAGGTCATCCATCTCGCTCACTGGA TTGTTTCCAATTGAAAACCAAAGGTTGCCTATTAGCACGCTTATCAGCGGAAAAAACCACTCTAAACTGCAACCTCGTTCAACCCACTGAGGAACAGCCC
DNA Sequence for Gene
>N005_RS15020
GTGAAAATTCTGTTGATCGGCGCCAACGGCACCATCGGTTCGGCCATTGCCAACGAACTGGCGCCACGCCACGAAATCATTCGAATCGGCCGCAACAGCG GTGAATTGCACGTCGATATCAGCGACAGCGCCTCGATCCGCGCCCTGTTCGAAAAAACCGGGCGCTTCGACGCGCTGATCTGCGCCGCCGGCAGCGTCAC GTTCGCACCACTGAGTGATATGACCGAGGAAAGTTTCGCCCTCGGCTTGAAGGACAAGCTGATGGGCCAGGTCAACCTGCTGCTGATCGGTCGGGAGTTC GCCAACGACGGCGCATCCTTCACCTTCACCACCGGTGTGCTGAGCCATGATCCGATCAGGAGCGGCGCTTCGGCAGCGCTGGTCAACGGTGCCCTGGACA GTTTCGTGCGCGCGGCGGCCATCGAGTTGCCAAGGGGCCTGCGAGTCAACTCGGTGAGCCCGAACGTGCTGCTGGAGTCCATGGACAAATACGCCCCTTA CTTCCGCGGCTACAAACCAGTGGCGGCCGCCGACGTGGCATTGGCCTACGCCAAGAGTGTCGAAGGCCTACAAACCGGCCAGACTTTTCATGTAGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATAGCACTTTGCCTACGCTCCCGCTTGTGATGCGGGAGCAGTCTGAGTAACGTGACGGCACCTGTCTGGAGACCCGATGATGCGTGCCGCCCGTTCCCTG TTGTGTGTTGCCCTCCTTCCCCTGTTCGCCGGCTGCCAACTGCTCGACGCCCCGCGCGAGAGCGCTTCCCATGCCGGACAGACGCGCATGCAAGGCGAGC TCACGGCGGCCGATGGCAAGCTGGTGTTCCAGCCGTGCCAGGAACAACGCCGCTACATCGTCAACGACAGCGGCGGCACCAGCGTGCTGCAACAAGCCGC TGCCCTGGCCGATGAGCGCGGCAAGCTGTTCGCCGACGTGCGCGGCCATATCGTCTCCAGCGCCGCGGCGGGGGCCGACAGCCAATTGATGGACCTCGTC AACATAGCGGACCTTGCGACGGGCACGGCCTGCGACGATGTCGACTTCAAACGGCTGGTGCTACACGCCACCGGCCACGGTCCGGAGTGGAGCCTCAAGG
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGANGTIGSAIANELAPRHEIIRIGRNSGELHVDISDSASIRALFEKTGRFDALICAAGSVTFAPLSDMTEESFALGLKDKLMGQVNLLLIGREF ANDGASFTFTTGVLSHDPIRSGASAALVNGALDSFVRAAAIELPRGLRVNSVSPNVLLESMDKYAPYFRGYKPVAAADVALAYAKSVEGLQTGQTFHVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site