Pseudomonas mediterranea CFBP 5447, N005_RS12395 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas mediterranea CFBP 5447 scaffold34, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAATCCGGCGCCGTTCTGCATGCTTGACGAAGTCGACGCGCCGCTGGACGACGCGAACGTGGGCCGTTACGCGCGCCTGGTAAAGGAAATGTCTGAAA CGGTGCAGTTCATCTACATCACCCATAACAAGATCGCCATGGAAATGGCCGATCAGTTGATGGGCGTGACGATGCACGAACCGGGCTGTTCGCGGCTGGT GGCGGTGGATGTCGAGGAGGCCATGGCGATGGTGGATGCCTGAAGCGGGATCTCTCGAGCAACTTCTTGACGAGTTGCCGGGACTTTTATCCCCGCCGAA GGCCGTTCAAATCACAGATTGGCACAAGCCTATGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGCTAGTTTAATGTCAATTTTTCGTGTGCGTGGGCA AAACGCCATTCAGAACATAGAGTTGGCGCCACGTTTTAAAGCGGTTTGCAAATAGCTAAGCCCCTTATTTTTCAGCATTTTTATAGAGGCACGGGATTAC
|
|
| DNA Sequence for Gene |
>N005_RS12395
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATCGTCATCGGCATCATTGTCATTGCCGGTATTCTTTTCGATGGCTGGCGCCGCATGCGCGGCGGCAAGGGGA AACTCAAGTTCCGCCTTGATCGCAGCCTGTCGAACCTGCCGGACGACGATGACAATACCGAGCTGCTGGGCCCCCCCCGGGTGCTGGACACCCACAAGGA GCCGCAGCTGGACGAGCATGACCTGCCGTCGGTGAGCGCGCCGGTGCGCGAACCCCGTGAGTCGGGTTCCAAGCGTGGCAAACGCAACAACGAACCGTCC CAGGGTGACCTGAACCTCAACCTCGACCTGGATGGCGGCCCGAGCTTCAGCAGCCGCGACGATTTCCCGGACGAGAACAAGGCGTCGGGCAGCGACAAGG AACAGGCCCAGGCTGAAGAAGTCCTGGTGATCAGCGTGATCTGCCGCGATCCGGCCGGCTTCAAGGGCCCTGCGTTGCTGCAGAATATTCTGGAAAGCGG CCTGCGTTTCGGCGAGATGGACATTTTCCATCGCCACGAAAGCATGGCCGGCAACGGTGAAGTGCTGTTCTCCATGGCCAACGCCGTCAAGCCAGGGGTG TTCGACCTGGACGACATCGATCATTTCAGCACGCCGGCGGTGAGTTTCTTCCTCGGCCTGCCAGGCCCGCGTCATCCCAAGCAGGCCTTTGACGTGATGG TGGCGGCGGCTCGCAAGTTGTCCCAGGAACTCAATGGCGAATTGAAGGATGACCAGCGCAGCGTGCTGACCGCCCAGACCATCGAGCACTACCGCCAGCG CATCGTCGAGTTTGAACGCCGGGCATTGACCCAGAAGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAGAGCGCCTCTGGTAGCCGCTTGTGGCAAACCGCTTTTGTGGCGAGGGGATTTATCCCCGCTGGGCTGCCAGGCAGCCCTCAAAATGTTGTGTTGCCA CAGAGTTTGCGAGTGCTGCGCACTCGAGCGGGGATAAATCCCCTCGCCACAGGTTCTCTGCCGAGCGTTACTTGACTGATTGAAATGAGCAGCCTCGGCT GCTCTTTTGCTTTATGAGAGAACACCCATGAATGCCGTCGAAACCCGCATCCTAGAGCTGCGAACCGAACTGGATCAGCACAACTATCGCTATCACGTCC TCGATGAACCGACCATCCCGGACGCTGAGTACGACCGCCTGTTCCACGAGCTCAAGGCCCTGGAGGCGCAGCACCCGGAGCTGGTGACCAGCGACTCACC GACCCAACGGGTTGGCAGCGTGGCGCTGTCGGCGTTCAGCCAGGTCCGTCACGAAATCCCGATGCTCAGCCTGGGCAACGCCTTCGATGAAACCACCATG
|
|
| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIIVIAGILFDGWRRMRGGKGKLKFRLDRSLSNLPDDDDNTELLGPPRVLDTHKEPQLDEHDLPSVSAPVREPRESGSKRGKRNNEPS QGDLNLNLDLDGGPSFSSRDDFPDENKASGSDKEQAQAEEVLVISVICRDPAGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEVLFSMANAVKPGV FDLDDIDHFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|