Pseudomonas mediterranea CFBP 5447, N005_RS05500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mediterranea CFBP 5447 scaffold31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTTTTGAAAGCCTGTATGCGCGGCATCGGCAGGGGCTCTACCGTTTCCTCGTGTCCTTGAGCAACAGGGCCGAGCTGGCCGAGGAAATCTTCCAGGACA CCTGGCTCAGCCTGATCCGCAGCAGCACCCAGCCACAAGGACGGGCGAGTTTTCGTACCTGGCTGTTCCAGATTGCCCGCAACCGTTTGATCGATCACTG GCGCCAGCACGGTGTTCACAATCCATTGCATGACAGCTATGACGAGCAGCTTCACGTCCAGACCGACGACGCCAATACCCCGGAGCAACAGCTGAGCCTG AGCCGCGATCAGGACCGTCTGGAAGCCGCGTTGCAAGCCTTGCCGGAAGACCAGCGCGAAGTCTTCCTGCTGCGCCTGCACGGCGATCTGGAGCTGCCAC AGATCGCCGCCCTGACCGGTGTCCCGCTGGAAACAGTAAAGAGCCGTTTGCGTTACGCCCAGCAGAAGCTGCACCGGCTGCTGGCCGAGGAGGTACCCGC
DNA Sequence for Gene
>N005_RS05500
ATGATTGACTCCCGACAGACCTCGGTTCCCGCCGACGAAGCGCTGATCGAGCATTTCCGCCAACACGCCGGCGGAGAGCCCCCCGCGTCCCTGGACGCCT TCATCCTGGCCACCGCCCGCCGCGAAGCGCCGGCGCCCAGGCCGAGCCTGTGGCAACGTTGGCTGCACGCCTGTCAGCGGCCGCGCTGGCAAATGGCATT CGCCACCGTGGCGGGTGTGGCGCTGATGATCGGCCTGATGCTGCGCTCGCCGGTCCCGAGGGACGAACTGCCTGCGCCGGCTGCACTGGATTATTCCGCT GCCCGTCAGGAGCTCGCCGTTGCCCCCGCTCCGGCCGCCCCTGCTGCCCCGGCACCCATGGCACGCATGGCAGCGCCAATGGGCGAACTGAGCCAGGTCC CGGAGAAGCCTGTGCAAGTCCTGGCAGATGAACCCATGGCGAAAAAGAGCAAGCCCGTGCCCGCCGTATCCCCTTCGCTGGAGCAGGGGTTGCTGGAAAT CCTACGGCTGCGCCAGACAGGGCAGACCAGGGCGGCGGATGAGAAGCTGCTTGCGCTGCACAAGCGGTTTCCCAAGGAGGATTTGCCGGCGCGGCTGGAG GCGTTGCGCAAGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAACCAAGGGCTGAGTCCTATTTCCTGCTTGTAATAGGTCCAAGACTCCAACCGACGGACGTTACCGATGTTACATTGACGTGTTGATCAATTTTGAT TAGCCTGACGGCGTCTGGATATATACGGAGCTTGGGCCATATAAGGCCTAGGTGTTCAGATGCCGCCACAGGTTCTCGGCCGTGCCGGTTGAAGGGGTTA TCCCTAAGGGCATCCGCGAAACCCTCCTTCGATTTCATCGTTGGAGGGTTTGCTTTTTCTGGCTACTGACGGCGTCTGTTACGTTGGAGGCCATTGCCTG TAGGTGCCTTGATCGATTCACCCCGCGACTTCTTCAAAAAAAGCTTCCAGGCCGTGATTTTGTCGGACTTTTTAAAGTTGACTGGTTCATTATCCGCTTC CTCATCTCGAACATATGCGCTCTCGATGAAAAGCCGTAAAGAATTGCGTGCATCGCCTCTTCTCACGTTGAAGAAAATCTCGTACTTGGTGTCCTTGGCG
Amino Acid Sequence
>hypothetical protein
MIDSRQTSVPADEALIEHFRQHAGGEPPASLDAFILATARREAPAPRPSLWQRWLHACQRPRWQMAFATVAGVALMIGLMLRSPVPRDELPAPAALDYSA ARQELAVAPAPAAPAAPAPMARMAAPMGELSQVPEKPVQVLADEPMAKKSKPVPAVSPSLEQGLLEILRLRQTGQTRAADEKLLALHKRFPKEDLPARLE ALRKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site