Pseudomonas mediterranea CFBP 5447, N005_RS03330 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas mediterranea CFBP 5447 scaffold30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACTACGCGATCCAGGCGATCAAGGATGTGCTGGAAACCGAGATCCCGGTGTTCGGTATCTGCCTCGGTCACCAACTGCTGGCCCTCGCATCCGGCGC CAAGACCCTGAAAATGGGTCATGGTCACCACGGTGCCAACCACCCGGTCCAGGACCTGGACACCGGTGTGGTGATGATTACCAGCCAGAACCACGGCTTC GCGGTGGATGAAGCGACTCTGCCGGCCAACGTGCGTGCGATCCACAAGTCGCTGTTCGACGGTACGCTGCAAGGCATCGAGCGCACCGACAAGAGTGCGT TCAGCTTCCAGGGCCACCCTGAAGCGAGCCCGGGCCCGAACGACGTGGCGCCGCTGTTCGATCGCTTCATCAATGAGATGGCCAAGCGACGCTGACCGCG TGAAGCCCGAGGGCGGCCCCGAGTGCGGCGGCCCCCGCGGGCGCTTCAAAGATTGTTCGACGGCCTAGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>N005_RS03330 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCTT GCAAAGCCCTGCGCGAAGAGGGTTATCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAAGAACGTCCCGATGCACTGTTGCCGACCATGGGCGGCCAGACGGCGCTGAACTGCGCCCTG GACCTGGAACGCGAAGGCGTCCTGGAAAAATTCGGTGTGGAAATGATCGGCGCCAATGCCGACACCATCGACAAGGCCGAAGATCGTTCGCGCTTTGACA AGGCAATGAAAGCCATCGGCCTGGAATGCCCACGCTCGGGCATCGCCCACAGCATGGAAGAGGCCAACGCGGTCCTCGAGAAGCTCGGCTTCCCGTGCAT CATCCGCCCGTCCTTCACCATGGGCGGCACCGGTGGTGGCATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGCCTGGACTTGTCGCCG ACCAAGGAACTGCTGATCGACGAATCCCTGATCGGCTGGAAAGAGTACGAAATGGAGGTTGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTCGACCCGATGGGTGTACACACCGGCGACTCGATCACCGTCGCACCGGCCCAGACCCTGACCGACAAGGAATACCAGATCCTGCGTAACGC CTCCCTGGCGGTATTGCGTGAGATCGGCGTGGAAACCGGCGGCTCCAACGTCCAGTTCGGCATCTGCCCGAACACCGGGCGCATGGTGGTCATCGAAATG AACCCGCGGGTTTCCCGTTCGTCGGCCCTGGCTTCGAAAGCCACCGGTTTCCCGATTGCCAAGGTCGCCGCCAAGCTGGCCGTGGGTTACACCCTCGACG AGCTGTCGAACGACATCACCGGCGGCAAGACCCCGGCGTCCTTCGAGCCGTCCATCGACTACGTCGTCACCAAGCTGCCACGTTTTGCCTTCGAAAAATT CGCCAAGGCCGACGCTCGCCTGACCACCCAGATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGGACCTTCCAGGAGTCCCTGCAGAAAGCCCTTCGC GGCCTGGAAGTGGGTGTCTGCGGCCTCGATCCGAAACTGGACCTGAGCAACCCGGAAAGCATGAGCGAACTCAAGCGCGAGCTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTGGCCGATGCCTTCCGTGCCGGCATGACCGTGGAACAAATCTTCGACATGAACATGATCGACCCTTGGTTCCTGGTGCAGATCGA AGATCTGATCAAGGAAGAGGAGAAGGTCAAGACCCTGGGCATGTCCAGCATCGACCGCGACATGATGTTCCGCCTCAAGCGCAAGGGCTTCTCGGACCAG CGCCTGGCCAAATTGCTGGGCGTGACCGAGAAGAGCCTGCGCGCTCATCGTCACAAGCTGGAAGTGTTCCCGGTCTACAAGCGCGTCGACACCTGCGCGG CCGAGTTCGCCACCGACACTGCCTACCTGTACTCCACGTACGAAGAAGAGTGCGAAGCCGCGCCATCGACGCGCGACAAGATCATGATCCTGGGTGGCGG TCCCAACCGCATCGGCCAGGGCATCGAATTCGACTACTGCTGCGTACACGCCGCACTGGCCCTGCGCGACGACGGGTACGAGACCATTATGGTCAACTGC AACCCGGAAACCGTGTCCACCGACTACGACACCTCCGACCGTCTGTACTTCGAACCGGTGACCCTGGAAGACGTGCTGGAAATCGTCCGTGTCGAGAAGC CGAAAGGCGTGATCGTCCAGTACGGCGGCCAGACTCCGTTGAAACTGGCCCGCGCCCTGGAAGCTGCTGGTGTGCCGATCATCGGTACCAGCCCGGATGC CATCGACCGTGCCGAAGACCGTGAGCGCTTCCAGCAGATGGTCGAGCGCCTGAACCTGCGTCAACCGCCAAACGCCACTGTGCGCAGCGAAGACGAAGCG ATTCGCGCCGCCGCCAAGATCGGCTATCCGCTGGTGGTGCGTCCGTCCTATGTACTGGGCGGCCGTGCGATGGAAATCGTCTACCAGGAAGAAGAACTCA AGCGCTACCTGCGCGAAGCGGTCCAGGTGTCCAATGACAGCCCGGTGCTGCTGGACCACTTCCTCAACTGCGCCATCGAGATGGACGTGGATGCGGTCTG CGACGGCAAGGACGTGGTGATCGGCGCGATCATGCAGCACATCGAGCAGGCCGGTGTTCACTCCGGTGACTCCGCATGCTCGCTGCCGCCTTACTCGCTG CCGGCTCACATCCAGGACGAGATGCGCGAGCAGGTCAAGAAAATGGCCCTGGAACTGGGTGTGGTCGGCCTGATGAACGTGCAACTGGCACTTCAGGGCG AAGACATCTACGTCATCGAAGTGAACCCGCGCGCGTCCCGTACCGTGCCGTTCGTCTCCAAGTGCATCGGTGTTTCCCTGGCGATGATCGCTGCCCGGGT AATGGCCGGCAAGACCCTGGCGGAGCTTGGCTTCACCAAGGAGATCATTCCGAACTTCTACAGCGTGAAAGAAGCGGTGTTCCCGTTCGCCAAGTTCCCT GGCGTCGACCCGATCCTCGGCCCTGAGATGAAGTCCACCGGTGAGGTGATGGGCGTTGGCGATACCTTTGGCGAGGCGTTCGCCAAGGCCCAGATGGGCG CCAGCGAAGTCCTGCCGACAGGCGGCACGGCGTTCATCAGCGTGCGTGATGACGACAAGCCACTGGTTGCAGGCGTGGCCCGTGATCTGATCAACTTGGG CTTCGAAGTGGTTGCCACTGCCGGTACCGCCCGGCTGATCGAGGCCGCAGGCCTGAAAGTGCGCCGCGTGAACAAGGTGACCGAAGGGCGTCCACATGTG GTCGACATGATCAAGAATGACGAAGTCACGCTGATCATCAACACCACTGAAGGCCGTCAGTCGATCGCCGACTCCTACTCCATTCGTCGCAACGCGCTGC AGCACAAGATCTACTGCACCACCACGATTGCTGCGGGCGAAGCGATCTGCGAAGCGCTCAAGTTCGGTCCCGAGAAGACCGTCCGTCGCTTGCAGGATCT ACATGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATAACCAAGTACCCCATGACTGTTCAGGGCGCTCGCGCCCTGGAAGACGAGCTGGCGCACCTGACCAAGGTCGAGCGTCCGCGCTTGAGCCAGGCAAT CGGTGAGGCCCGCGAACTGGGCGATCTCAAGGAAAATGCCGAATACCATGCTGCCCGTGAGGAGCAGGGTATGGTCGAGGCGCGGGTACGAGACATCGAA GGTCGCTTGCAGAACGCGGTGATCATCGATGTCACGACGATCCCGCATACCGGCAAGGTCATTTTCGGCACCACTGTGGAGATCGCCAACGTCGAGACCG ATGAAAGCGTGACTTACCAGATCGTGGGTGAGGACGAGGCGGACATCAAGCTCGGCAAGATTTCCGTTGGTTCGCCTATCGCTCGCGCCTTGATCGCCAA GGAAGAAGGGGATGTGGTGACGGTGAAGACGCCCGGTGGTGTCATCGAGTATGAGATTGTCGAAGTCCGCCACGTCTGAACGAAGGCGTCCGCTGCGTGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKAIGLECPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDPKLDLSNPESMSELKRELTVPGAERIWYVADAFRAGMTVEQIFDMNMIDPWFLVQIEDLIKEEEKVKTLGMSSIDRDMMFRLKRKGFSDQ RLAKLLGVTEKSLRAHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYQEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGKDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLAELGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTARLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site