Pseudomonas lundensis DSM 6252, TU74_RS05305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas lundensis strain DSM 6252 4_247651_33.8192, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCAGGGCGGGCCGCTGATGCACGTGATTGCGGCCAAGGCCGTGTGCTTCAAGGAAGCCCTGGAGCCTGCGTTCACCACCTATCAACAGCACGTGATC GACAACGCCCAGGCGATGGCCGAGGTGTTTATCAAACGCGGCTATGACGTGGTGTCCGGTGGTACGGACAACCATTTGTTTCTGGTCAGCCTGATCCGTC AGGGCTTGACCGGCAAAGACGCCGATGCCGCGCTGGGCCGCGCCCACATCACCGTCAACAAGAACGCAGTGCCCAATGACCCGCAGTCGCCGTTCGTGAC CTCGGGGTTGCGCATCGGCACCCCGGCGGTCACCACCCGCGGTTTCAAAGTGGCGCAATGCACCGAGCTGGCTGGCTGGATCTGCGACATCCTCGATCAT CTCGGCGATGCCGACATTGAGGCGGACGTGGCGCGGCAAGTGACGGCGCTGTGCAAAGACTTCCCGGTTTATCGCTGAGCGCGGTTTTGGAGTAGATCCT
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| DNA Sequence for Gene |
>TU74_RS05305
ATGCAACGGTATTCAGGCTTCGGCCTCTTCAAGCACTCCCTCAGCCACCACGAAAACTGGCAGAAGATGTGGCGCACACCGACGCCGAAAAAGGTCTACG ACGTGGTCATCGTCGGGGGCGGCGGGCACGGGTTGGCCACGGCGTATTACCTGGCCAAGGCACACGGCATCACCAATGTGGCCGTGGTCGAGAAAGGCTG GCTGGGGGGCGGCAATACAGCGCGTAACACCACCATCGTGCGTTCCAACTATTTGTGGGACGAGTCGGCGCACTTGTATGAACACGCGATGAAACTCTGG GAAGGCCTGTCCCAGGACCTCAACTACAACGTCATGTTCTCCCAGCGCGGCGTCTACAACCTGTGCCATACCCTGCAAGACATGCGCGACTCGGAACGCC GGGTCAGCGCCAACCGCCTCAACGGCGTGGACGGCGAACTGCTCAACACGCAGCAGGTGGCCGATGAAATCCCGTACCTTGATTGCTCAAAAAACACCCG CTACCCGGTCCTGGGCGCCACCGTGCAACGTCGCGGCGGCGTGGCGCGTCACGACGCCGTGGCCTGGGGCTTTGCCCGGGCAGCCGATGCGTTGGGCGTG GACTTGATTCAACAAACCGAAGTGCTGGGCTTTCGCAAGGAAAACGGTGTGTGCATCGGCGTCGAAACCAGCAAAGGCTTTATCGGCGCCAAGCGCGTGG GCGTGGTCACGGCGGGCAATTCGGGGCACATGGCGCGTCAGGCCGGGTTCCGCCTGCCCATCGAGTCGCACCCGCTGCAAGCGCTGGTGTCCGAACCGAT CAAGCCGATCATCGACAGCGTCATCATGTCCAACGCCGTCCACGGCTACATCAGCCAGTCCGACAAAGGCGACCTGGTGATCGGCGCGGGGATTGACGGC TGGGTCGGCTACGGCCAGCGCGGCTCCTACCCGGTGATCGAACACACGATCCAGGCGATTGTGGAAATGTTCCCGGTGTTGTCCCGCGTGCGCATGAACC GCCAGTGGGGCGGCATCGTCGACACCACGCCCGACGCGTGCCCGATCATCTCCAAAACCCCGGTGCCCAACCTGTTTTTCAACTGCGGCTGGGGCACGGG CGGCTTCAAGGCCACCCCAGGCTCGGGCAACGTGTTTGCCGCCAGTCTGGCCAAGGGCGAGATGCACCCGCTGGCCGCCCCGTTTTCCCTTGAGCGCTTC CACAACGGCGCGCTGATCGACGAACACGGCGCTGCTGCCGTCGCTCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGAGAAAGACCTATGTTGCATATCTTCTGTCCCCATTGCGGCGAGTTGCGCTCTGAAGAAGAGTTCCACGCCTCAGGGCAAGCACACATCCCGCGCCC GCTGGACCCCAATAGCTGCACGGATGCCGAGTGGGGCGATTACCTGTTCTTTCGCGACAACCCGCGCGGCCTGCACCACGAGTTGTGGAACCACGTGGCC GGGTGCCGTCAGTTTTTCAACGCGACCCGCAACACCGTGACGTACGAAATCCTTGAGACCTACCGCATCGGCAGCCAGCCGCAGTTCACTGAACAGTCGC CTGCGCCAGCCTCGACAACGGCCCCCCGCGAGCTGGGAGAAAAGGTATGAGCCAGACCCATCGCTTGGCCCATGGCGGCCGTGTTGATCGCACGCGCGTG CTGACCTTCACCTTTAACGGGCACACCTACACCGGTTATGAAGGCGACAGCCTGGCGGCCGCGTTGTTGGCCAATGGCGTACACATCATCGGCCGCAGTT
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| Amino Acid Sequence |
>sarcosine oxidase subunit beta
MQRYSGFGLFKHSLSHHENWQKMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKAHGITNVAVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLW EGLSQDLNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNTQQVADEIPYLDCSKNTRYPVLGATVQRRGGVARHDAVAWGFARAADALGV DLIQQTEVLGFRKENGVCIGVETSKGFIGAKRVGVVTAGNSGHMARQAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG WVGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNLFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSLERF HNGALIDEHGAAAVAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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