Strain | Pseudomonas lundensis strain DSM 6252 4_247651_33.8192, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACGATTCTGGGGGATGGCCGTGTGGTACTGATCCTGGATTTGCTGGCCTACATCCGCGCGCATCAGGTGCGTCAGCCGTTGCTGCGCGCCCAGCACGAA GCAGGCGGCGGACTCGAATTCATCCCCGCCGTGCGCCCGCCGCTGGTGCTGGTGGTCGACGATTCGGTGACCGTGCGCAAAGTCACCAGCCGCCTGCTGG AGCGCAACGGCATGAACGTCATCACCGCCAAAGACGGGGTCGACGCCATGAGCGTGCTCGAAGAACACACCCCGGACCTGATGCTGCTGGACATCGAAAT GCCGCGCATGGACGGCTTCGAAGTGGCCACGCATGTGCGTAACGACCCGCGCCTCAAAGACATGCCGATCATCATGATTACCTCGCGTACCGGGCAGAAA CACCAGAACCGCGCCATGGCCATTGGCGTCAACGACTACCTGGGCAAACCCTACCAAGAGTCGGTATTGCTGGAACGCATCGCCTACTGGAGCACCTTCC
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DNA Sequence for Gene |
>TU74_RS04695
ATGCTTGATCACCGTGTAGGCAGTCTGACGTGCCTGCTCTTGCCGCTGGCCGATCGCGACCTGTTACTGCCCAACGTCGCGATCGCAGAACTGATCGACT ACCAGCGTGGCGAACCCAGTAGTGACTCGCCGCCGTGGCACTTGCGCCAGATCATCTGGCGCGACCATCCCTTGCCGCTCATCAGCTTCGAAGCGGCCTG CGGCAGCCCGCTGCTGATTGGCGACCGCGCGCGCATCGTCATCCTCAACACCCTGGGCGGCAACCCGGCGCTCAAGTACATCGCCATGGTGGTCCAAGGC ATCCCGCGTTCCTACAAACTCGACAGCCAACTGAGCTTTGTCGACGTGCCCCTCTGCCCGCTGGAACGGGCTGCCGTGCAAGTGGGCGAGCATGTGGCCA AGATCCCGGATTTGTGGGCGTTGGAGCGGTTGGTGTTGGGGGCGCAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGGCCTTATTGAATCAACTCAATCGAAACGGGACGTTAATGAACAGGAGTTGTGTGGGTGAGTGAGTTTGTGTCGCACGCCATAAATATGCCCTACGG CATTGATTTGGTTTTTTGGGCTGTCTTCATGTTCTTGGCCGTGCTGGTGGTCACTAAGTTTCCGCAGGGCATAGGGTGTCTTTTTGCATTCTTAGTGTCG GTGACTGGCGCCGTTACAATCCTGACGCATATGTATTTTGTAGAAGGGGAGTTGAAAAAAAGCTTCGATTATCCCGAGATCATTGTTCAAGCGGCGATTG AAAAATTGTCGGCTGAAAGCATCCAGTGCGGCAAAGATACAACGCGGTGCTCTGACCTCGATCAGTTGAAGTTGAACGTGGAACAAGCTTTGGCCAGCAG GCAGCGCAGCCAGACCGAAGAGGAGCAGCAGTCCACGGCGTTCGCACTGGTCAGCAACTTGTGCATCTTTACGTTGGGCGGGATGTCAGCGGGTTTCATT
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Amino Acid Sequence |
>chemotaxis protein
MLDHRVGSLTCLLLPLADRDLLLPNVAIAELIDYQRGEPSSDSPPWHLRQIIWRDHPLPLISFEAACGSPLLIGDRARIVILNTLGGNPALKYIAMVVQG IPRSYKLDSQLSFVDVPLCPLERAAVQVGEHVAKIPDLWALERLVLGAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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